Trachymyrmex septentrionalis: 108752826
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Entry
108752826 CDS
T11226
Name
(RefSeq) probable histone-binding protein Caf1 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03082
ATP-dependent chromatin remodeling
tsep03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108752826
03083 Polycomb repressive complex
108752826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsep03036
]
108752826
Chromosome and associated proteins [BR:
tsep03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
108752826
Histone modification proteins
HAT complexes
HATB complex
108752826
HDAC complexes
Sin3A-HDAC complex
108752826
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
108752826
PRC2.2
108752826
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
108752826
Heterochromatin formation proteins
Other heterochromatin formation proteins
108752826
Chromatin remodeling factors
NuRD complex
108752826
NuRF complex
108752826
NuRF complex (fruit fly)
108752826
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF12
WD40_RFWD3
ANAPC4_WD40
eIF2A
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
NBCH_WD40
MIOS_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
108752826
NCBI-ProteinID:
XP_018349437
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MERRSSRLAKCKFPSNQDQNLEQPDVKDLTNKPSFMMDKSNYILEPTPSAVMGESQPSKG
MLSMIQEAELEKNIKKSDKPNKKNTPSKIVRINSIQPNVPNIIKRIKYNGLESSQGDLSA
AVCSEGFDDAVEERIINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDY
SIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNEKGEFGGFGSVSGKIEIEIKI
NHEGEVNRARFMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGY
GLSWNPNLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDVAWHLLHES
LFGSVADDQKLMIWDTRCNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALW
DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSSEDAED
GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPETPGSEI
ETGGS
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggaaagacgaagcagtcgtttagctaagtgtaaatttccaagtaaccaagatcaaaat
ttggaacagcctgatgtaaaagatcttaccaataaaccatcttttatgatggataaatca
aattatatacttgaacctacaccatctgctgtgatgggtgaatcgcaaccgagtaaaggt
atgttgagtatgattcaagaagctgaattggagaaaaacatcaaaaaaagtgacaaaccg
aataagaaaaatacaccatctaagatagtaaggattaattctatacaaccaaatgtacca
aatattatcaaaagaattaaatacaatggacttgaatcttcacaaggagatttaagcgcc
gctgtttgttcagagggctttgacgacgctgtggaggaacgtattatcaatgaggaatat
aaaatatggaagaagaatacaccatttttatacgatcttgtgatgacacatgctttggaa
tggccttctttaacggctcaatggctgcctgatgtcaccagacctgaaggaaaagattat
tcaatccacaggttaattttaggcactcatacttcagacgaacaaaatcatttgctcatt
gccagcgtccagctgccgaatgaagatgcccaatttgatgcttctcattatgataatgaa
aagggtgaatttggtgggtttggttctgtgagtggcaaaatcgagatcgagattaagatt
aatcatgagggtgaagttaatagagcgcgatttatgccgcaaaatccgtgtgtaatcgca
acaaaaactccctcgagcgacgtgcttgtatttgattatactaaacatcccagtaaacca
gatcccaatggagaatgtcatccggatttgagattgcgaggacatcaaaaggaaggctat
ggactttcatggaacccgaatctcaatggatatttacttagcgcgtctgacgaccacacg
atttgtttgtgggacatcaatgccacaccgaaggaaaatcgtgttatcgatgcaaaaact
atctttacagggcacacagctgtagttgaagacgttgcttggcatctgttacatgaatca
ttatttggttcggtcgctgatgatcaaaagctcatgatctgggacactagatgcaacaat
actagtaaaccaagtcatactgttgatgctcataccgctgaggtaaattgcttgagtttc
aatccgtattcggaatttatcttggctactggcagtgctgataagactgtggcactttgg
gatttacgaaatcttaaattaaaattacattcatttgagtcacacaaggacgagatcttc
caggtccaatggtcaccacataacgaaactatattagcaagcagtggtacagatagacgg
ttacatgtttgggatctcagcaagattggcgaggagcagtccagcgaagatgctgaagat
ggaccaccagaacttctgtttatacatggaggtcatactgcgaaaataagcgacttttca
tggaatccgaatgaaccgtgggtcatatgctcagtatcagaagataacataatgcaagtg
tggcaaatggcggagaatatttacaacgacgaggaacccgagacacctggaagtgagatt
gaaactggtggttcataa
DBGET
integrated database retrieval system
