Trachymyrmex septentrionalis: 108752863
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Entry
108752863 CDS
T11226
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03013
Nucleocytoplasmic transport
tsep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108752863
03015 mRNA surveillance pathway
108752863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsep03019
]
108752863
03041 Spliceosome [BR:
tsep03041
]
108752863
Messenger RNA biogenesis [BR:
tsep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108752863
Spliceosome [BR:
tsep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
108752863
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
108752863
NCBI-ProteinID:
XP_018349525
LinkDB
All DBs
Position
Unknown
AA seq
1211 aa
AA seq
DB search
MMYTGTTASQDTRFSDKEKKLLKQMKFGDSLTQKVDMSKVKLDVIKPWITTKITQILGME
DDVVVEFVYNQLEEKFPDPRKMQINLTGFLNGRNARSFMGELWDLLVSAQESVTGIPEAF
LQQKKDQIKKRLEEQEKLQASLAEKEKEKEREKEKDDADNKVKKEEKDRGSSKERRRDRS
RDRDRDRSKRSRSRDRHRDRDRSSRKRRSVSRSPNKNSKDNGKDMPDVKIEREDSPQPEN
AIPLMPVKTKPEAAVAISRLQAKLMSIADGKKKNNRTPSPESVDKSARKSRSASKSPTNR
SKKSRSKSPSRDSKTRRSRSPASKSRRSRSKSRSRRSRSKSRRSKSRSQDRTKSKRSKSK
SPRSRSRSRSRSRSKKSRSKSEDRSKSRKSRSVSSDSRSSKSRSKSTEKQKANADSNRKR
NGSTSSSSESEVDKDGKDKSDFEIRKKKDGVQAKRSYRKTNKDDSGSDSDSSRERKSAPK
RRSPSPRKDRGRSKDRDRNRSRDRSRDRSRDRSRDRSRDRSRDRNRRRSLDRDRDRRRER
ERERERERLDRYSGSRSMRPPSVRRPLNRRSSPPRRSPARYRRRSPSPEDRRRRRSLDRR
RRSSERRDRRRSPDRRGSRRSPDGRDRSSRYDRSSSRDRSSRRDRSRERRDKDRRSRSKD
RRSRSKDQRSSVDRSRDEKRSPDRSKGTKDKAKDRKVDEKTKRPPDTGSRKELRNGRSKS
SSSESSESSSSSNEDESLRKSIERKPPQEKREKEREHADDAKKKEKEKTVKEEPAKRPEK
EIKKIEPVAVKKPEPSVSPKKIQATSLPVTRHRFSKSLSRTPSPFKKTEDIVAVAKIKQT
IKEDTKDESPTTKTGEVNFTTGDAFPLKKDEKSTLKSTKLVTEDKKSTQKPLELPSKKPI
EMAKKTKREKRDGSTDSEDSDGEGKRKVKKTEKSKKSKKTSTDEDKSDKSRAGSSSDSED
DRKHSDKNKKVRDTSRTDSIDDRNKDRKDTRKREIAENDSRKRSRKEMEEELKKSKRSRR
DSSSGEEEQKSKRGRNEDDRSRSRKSKKDSSSDEEPKKMKKRRDTSSDDEKSRSRKSRKD
STSEDDSKSKSKKSKRDSSSEDDDPGDKDLKKKRKVDDSSDDEKVKKKRKKKTKTSTSES
EESEIEEKKKKKEKKHKKHKKHKKHRKHKKKKVADSDESDVSEGNTEELEKKLREKALKS
MKKGHSIERSD
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacacagggacgactgcttcgcaggacaccaggttcagcgacaaggaaaaaaaa
cttctaaagcagatgaaatttggagattcattaacacaaaaagtggatatgagtaaagtg
aaacttgatgtgattaagccttggattacaacaaagatcacacagattttaggaatggaa
gacgatgtggtggtagagtttgtgtataatcagcttgaggagaagtttcctgacccccga
aaaatgcagatcaacctgacaggcttcctgaacggtaggaatgcccgttctttcatgggt
gaattatgggaccttctggtctcagctcaagaaagtgttacgggcattcccgaggctttc
ttgcagcaaaagaaagatcaaattaaaaagcgtttggaagagcaagagaagcttcaagca
tcgttggcggagaaagagaaagaaaaggagcgtgaaaaagaaaaagatgatgctgataat
aaagtgaagaaggaggagaaagatagaggctcatctaaggaacgtagaagagatcgaagt
agggatcgtgatagagacagaagtaaaaggagcagatcacgtgatcgacatagggatcgt
gatcgatcgagtcgtaagagaagatccgtttcaagatcaccgaataaaaattcgaaggat
aacgggaaagatatgcccgacgttaagattgaacgagaagattcgccgcaaccggaaaat
gctatacctttgatgccagttaaaaccaagccggaagccgcagtagcaatatcaagattg
caagccaaattgatgagcattgctgatggaaagaaaaaaaataatcgcacaccatcgccg
gaatcagtggataagtcagcaaggaaatcgcgatctgcatctaaatcgccaacaaatcgt
tcaaagaaatctagaagtaagtcacctagccgagattcaaagacacgtcgatcacgatcg
cccgcttcgaaatcaagacgatctcgttcaaaatcaagatctagaagatctcgatctaaa
tctaggagatcaaaatcgcgctcgcaggaccgtacgaagtctaagcgaagcaaatccaaa
tcaccaagatcacgatcacgatcgcgatcgcgatcgcgatccaagaaatcccgatccaaa
agtgaggacaggagcaagtcgagaaaatcaagatccgtctcgagtgactcaagatcatcc
aagtcgcgctcgaagtctacggagaagcaaaaggccaatgcagattccaatagaaaacgt
aatggtagtacgagcagcagctctgaatcagaagtggacaaagatggaaaggataagagc
gacttcgagatacgaaagaagaaggatggcgtgcaagctaagagatcctacaggaaaaca
aacaaagatgatagtggtagtgatagcgactctagtcgggaaagaaaatcagctcctaag
cgaagaagtccttcgccacgtaaagatagaggacgatctaaggatagagacagaaataga
tcacgagatagatcacgagacagatcgcgagatagatcacgagatagatcacgcgataga
tcacgagatagaaatcgaagaagatcattggaccgggatcgcgacaggaggagggagcgt
gaaagggagagggaaagggagagattagaccgatacagcggcagccgcagcatgcgacca
ccttcggtgcgcagaccgcttaataggcgaagcagtcccccacgcagaagtccggcgaga
tatcgtcgtaggtcaccgagtcctgaagacaggcgtcgcaggagatcactggatcgtcga
agaagatcatcggaaagacgcgataggcgccgttcgcccgatcgacgtgggagccgacgt
tcgccggatggacgggatcgatcgagcaggtatgatagatcttcctcacgcgacagatca
agtagacgggatcgctccagagaacgacgggataaggatcgtcgatctagatctaaggat
cgtagatcgagatccaaggatcaaagatcatcagtggatcgttcgagagatgagaagcgg
tctcctgatcgttcgaagggtaccaaggataaggcgaaggacaggaaagtggatgaaaaa
actaaaagaccgcctgatacaggatcgcgaaaagaattgcgaaatggccggtctaaatca
agtagctcggaaagtagcgagagtagttcctctagcaatgaggacgagtcacttagaaaa
tcgatcgaacgcaaaccgccacaagagaagcgggaaaaagaacgcgagcacgcggatgat
gccaagaagaaggagaaagaaaagacggtgaaagaagaacctgctaagcgtccagaaaaa
gaaattaagaagatagaaccggtcgctgtgaaaaagcctgaacctagtgtttctcctaaa
aaaattcaagctacatcacttcctgttaccagacacagattctcgaagagtttgtcgcgt
acaccttcgccgtttaagaagaccgaagacatcgtggcagtagctaaaattaaacagacg
attaaagaagacactaaggacgaatcaccaacaacgaagactggagaagtgaattttacc
actggagatgctttccctttaaagaaggatgagaagtcgactttgaaatcaacaaaatta
gtaacagaagataaaaaatctactcaaaaaccattggaacttccatccaagaaacctata
gaaatggctaaaaaaacaaaaagagaaaagcgtgatggctctacagacagtgaggatagt
gatggtgaaggcaagagaaaagtgaaaaagacagaaaaatcgaagaaatctaagaaaact
tcgaccgatgaagataaatctgataagagcagagctggatccagttcggattctgaagat
gatagaaagcattcggataaaaataagaaagtcagagatactagccgaactgattcaata
gatgatcgtaacaaggatagaaaggatactagaaaacgtgaaattgctgaaaatgactcg
cgaaagcgttcaagaaaggaaatggaagaagaattaaaaaaatcaaaaagatcacgaaga
gattcttcttcaggtgaagaagaacaaaaatctaaaagaggtagaaatgaagatgacaga
tcaagatctcgaaaatcgaagaaagactctagttccgatgaagaacctaaaaaaatgaaa
aagaggagagatacctcatctgatgatgaaaaatctagatcacgaaaatccagaaaagat
tcgacaagtgaagatgactccaaatcaaaatcgaagaaatcgaaacgagattccagctca
gaagatgacgatcctggagataaagatttgaagaagaaaagaaaagttgacgatagttcg
gacgatgaaaaggtgaaaaagaagcgtaagaaaaagacaaaaaccagcactagtgaatcg
gaggaaagtgaaatcgaagagaagaaaaaaaagaaagaaaagaagcacaagaaacacaag
aaacataagaagcacagaaagcacaaaaagaagaaagttgcggattcagatgaatctgat
gtaagtgaaggtaatactgaagaactggaaaagaaacttcgggagaaggcattaaaatca
atgaaaaaaggacatagcattgaacgaagtgattga
DBGET
integrated database retrieval system
