Trachymyrmex septentrionalis: 108752877
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Entry
108752877 CDS
T11226
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108752877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsep03019
]
108752877
Messenger RNA biogenesis [BR:
tsep03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
108752877
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
108752877
NCBI-ProteinID:
XP_018349551
UniProt:
A0A195F203
LinkDB
All DBs
Position
Unknown
AA seq
518 aa
AA seq
DB search
MADESEDQWLYGDSTDGKEYTSTNIQSEIQQNDSTLSEVQENLQIREDQKMEGTGEIPSE
MQEVTDSLGDGDEESSSLNNAQEENLEASKNGTRDASSQEDGEAPSESDSDDDVHVVIGD
IKSAPTYGNLNIKRGGLLTNTSGVSDKLNKQPGKFSIDEFETIGVINGIPAHEFNLDQLE
DKPWRQPGADITDYFNYGFNEDTWRAYCERQKRMRSESGVGLVLNAGSGSGNPSGMRMPQ
VAITNDNSKYSGIMGPKRAGPPPGRKMAGTIDVIGSSGLASRRNLDKSPPKGNVIQVMTA
DRREYSRKPGFPDMSVPPPGAGMPPPPFDIPPPGYAGEPTPFYMPETDPYYQSYEPTQDN
QWGNDPTWQPTNLAIPMTEGEDDKDMGPKTIPTMVPPTNIPPLMQPRDQRDGRDRERDRD
RDRDRELDSMSRDRDKDRDRDRDREKDSMMRDRDRDSMTRDEDRERDRSRSQYRHKDRHR
HRSRSRSRRHKSRSRSPTRSRKKKSRRSDRERSKEESE
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgaaagcgaggatcaatggttatacggggattcaacggacggcaaggagtac
acgtcgacgaatattcaatcagagattcagcaaaatgactcgacactctccgaagttcag
gagaacttgcaaattcgggaggatcagaaaatggaaggtactggtgaaataccgtccgag
atgcaagaagttaccgactctcttggcgatggtgatgaagaatcttcttcgttgaataac
gcacaagaagaaaatttagaagcaagtaaaaatgggacgagagatgcctctagtcaggaa
gatggcgaagctcctagcgaatctgattccgatgatgatgtacatgttgttattggtgat
atcaaatcagcaccaacatatggtaatttaaatatcaaaagaggaggattgctaacaaat
acatctggtgtatcagacaaattgaacaaacagccaggaaagttcagtatagatgaattt
gaaactatcggcgtgatcaatgggataccagcccatgagtttaatttagatcaattggaa
gataaaccatggagacaacctggtgcagatatcacagattatttcaactatggtttcaat
gaagatacctggagagcgtattgcgaacgtcagaagcgaatgcgaagcgagtctggagtg
ggattggtcttaaatgcgggtagcggtagtggtaatccaagtggcatgagaatgcctcaa
gtggcgataaccaatgacaacagcaaatactctggcattatgggtcctaagagagctggc
ccaccacctggaaggaaaatggcagggactatagatgttataggaagttctggtttagct
tctagaagaaatctggataaatccccaccaaagggaaatgttatacaagttatgactgct
gacagaagagagtattctagaaaaccaggttttcctgacatgagtgtaccacctcctgga
gcaggaatgccaccaccgccatttgatattcctccaccaggatatgctggagaaccgacg
ccattctatatgccagaaactgatccatattatcagagttatgaacctacacaagacaac
caatggggcaatgacccaacatggcagccaacaaatctggcaatcccgatgactgaaggt
gaagatgacaaagatatgggacctaagacgatacctacgatggttccaccaacaaacatt
ccacctctgatgcagccgcgcgatcagagggatggtagagacagggaacgagacagagat
agagatcgcgaccgggaattggattccatgagcagagatagggacaaggatagagatcgc
gatcgtgatagagaaaaggactccatgatgagggatcgcgatagagactctatgacgcga
gatgaggatcgagagcgtgatagatccaggtctcaatatcgacataaagatcgacatcgg
catcgatcaagatcgcgatctcgtagacacaagtcaagatcacggagtccaactcggtcg
cgtaagaagaaatctagacgctcggatagggagcgttccaaggaagaaagtgaataa
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