Trachymyrmex septentrionalis: 108753213
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Entry
108753213 CDS
T11226
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
tsep Trachymyrmex septentrionalis
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tsep03041
]
108753213
Spliceosome [BR:
tsep03041
]
Common components
Common spliceosomal components
General mRNP proteins
108753213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
Nup35_RRM_2
RRM_7
RSRP
Motif
Other DBs
NCBI-GeneID:
108753213
NCBI-ProteinID:
XP_018350112
UniProt:
A0A195F0G1
LinkDB
All DBs
Position
Unknown
AA seq
528 aa
AA seq
DB search
MRGVSESSPTRVMAEDLDVEAMLEAPYKKGEQDSSSKDKSSKENGSSRKSSGKSKHRSRS
RSRSRDRDRRDKDRRDRERDRDRDRDRDRDRDRDRDRRRRSRSRERRDRERDRDSDRDRD
RRDRDRDRDRRRKRSLTPLTLPRARPPFGKGHSPLGINDELTPEERDARTVFCMQLSQRI
RARDLEEFFSSVGKVQDVRLITCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIV
VQHTQAEKNRMGNSMPNLMPKGQTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIM
DPETGRSKGYGFLTFRNADDAKKALEQLNGFELAGRPMKVGNVTERTDLIQGPSLLDTDE
LDRSGIDLGATGRLQLMFKLAEGTGLEIPPAAANALNMAPVMAQPQPPPQAAPPIATQCF
MLSNMFDPQNETNPNWAKEIRDDVIEECNKHGGVLHVYVDQASPQGNVYVKCPSIATAVA
AVNSLHGRWFAGRVITAAYVPVVNYHSLFPDAMTALQLLVPSAPRRGM
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggcgtttcagagagctccccgactcgcgtaatggcggaggatttggatgtcgag
gcgatgttggaggcgccgtacaagaaaggggagcaggactcctcttccaaagacaagtcc
tccaaggagaatgggtctagtcgcaaatcatctgggaaaagcaaacatcgctcgcgttca
cgttcacgatccagagatcgcgatcgccgagacaaagatcgacgggatcgcgagagagac
agagatcgggaccgcgatcgggacagagatcgcgatcgcgaccgcgaccgtcggcgcaga
tccagatcgcgcgaaagacgagatcgggaaagagatcgtgacagtgatcgggacagggac
aggcgagacagagatcgggatagagacagaaggaggaagagatcgctgacaccgctgacc
ttacctagagcccgaccgcccttcggtaaaggtcacagcccgttaggaataaacgatgaa
ttgacaccagaggagcgagatgctcggactgtcttttgtatgcagttaagtcaacgaatt
cgtgcgcgtgatttagaagaattcttttcaagcgttggcaaggtacaggacgtcagactt
atcacatgcaacaaaactcgaagattcaaaggtattgcctatgtggaattcaaagatcca
gaaagtgtaacacttgctcttggtttgtctggtcaaaagcttcttggagtgcctattgta
gtacagcatacacaagctgagaaaaatcgtatgggtaattcaatgccaaacctaatgcct
aagggacaaacaggacccatgcgattatatgtaggatctttacattttaatatcacagaa
gatatgcttcgtgggattttcgaaccatttggaaagattgacaacatacagttgattatg
gatcctgaaacagggcgcagcaagggttatggtttcttgactttcagaaatgcagacgat
gcaaaaaaagcgttggaacaattgaatggattcgagctcgctggtagacctatgaaagtt
gggaatgtaacagaacgaactgatctgattcaaggaccttctctactcgatactgatgaa
ttagatcgtagtggaattgatcttggagcaactggaagattacaactgatgttcaaattg
gcggaaggtaccggtctggaaattcctcccgctgcagcgaacgctttaaatatggcacca
gtaatggcgcagccgcaaccaccaccccaagccgcgcctcctattgcgacacagtgtttc
atgttatccaacatgttcgatccgcaaaatgagacgaatcctaactgggcgaaagagatc
cgcgacgatgtgattgaggaatgtaacaagcacggtggcgttctgcacgtatacgtggac
caagcatcaccacaaggcaacgtttatgtaaagtgtccgtcaatcgcgactgctgtggcg
gctgtgaactcgctgcacggtcgatggtttgccggccgcgttataaccgcagcttatgtg
ccggtagtgaattatcactcgttatttcccgatgcaatgaccgcgttacaattattggtg
ccgagcgcgccgcgaagaggaatgtga
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