Trachymyrmex septentrionalis: 108753274 Help Entry 108753274         CDS       T11226                                  Name (RefSeq) collagen alpha-1(I) chain-like   KO K19719   collagen type II alpha Organism tsep  Trachymyrmex septentrionalis Pathway tsep04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:tsep00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     108753274  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:tsep00536]     108753274 Glycosaminoglycan binding proteins [BR:tsep00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    108753274 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Motif Other DBs NCBI-GeneID:  108753274 NCBI-ProteinID:  XP_018350227 LinkDB All DBs Position Unknown AA seq 1510 aa AA seqDB search MRRRALELITGLLVVQLLLPLPDQVNAMKNRLRKQRSKPQEHQAQQSSNDYEYDYNYENY DEYDEKNETTTILPSRAISSDITQLSERSEITTEAFLRRETPTNLPAPTTTQFYDHGRSE ETSSTSARDYSVLPTEILPGESNIYSSVAVPGPRGSPGRPGDDGRPGDSGYPGQPGTPGI PGPPGPPGPVPDVSLYYQQLALSQANEDKGPSGAAASLYGPEALSYIQAQVGPIGPRGPP GPSGPPGPQGFQGIRGETGELGSPGPPGMPGPRGLPGLPGKDGISGEDGETGPLGSPGPV GQRGLPGIPGLPGLKGHRGFPGLDGAKGEQGTSGEKGSMGSPGPMGPVGPMGPAGPRGER GREGPSGPPGLRGLDGIAGPPGQPGVIGKPGSPGFPGNPGVKGDQGPQGPTGNQGLQGPR GESGRPGQPGETGPQGPQGKDGIPGEKGATGAIGPVGMVGFPGARGQPGTPGNPGTPGAK GAPGLPGDRGLKGDTGVKGDSGMPGPRGLPGPPGNEGKRGKRGMRGPIGSVGPPGERGVS GERGFPGSDGPIGPQGQPGDRGPLGAVGSKGATGDPGRPGAAGLQGARGLMGRPGASGKP GNPGERGIQGADGKPGEQGLPGLQGLPGPMGTPGERGYSGERGKDGEPGNPGPPGPRGDT GKEGPPGVQGPPGPSGSDGVRGLPGPTGSRGFQGLPGAAGNPGVPGKDGEAGVQGHPGPP GMVGDRGERGLPGERGLIGPPGPMGPRGETGTQGSDGLIGLPGLKGDKGSFGSPGLLGLP GARGLSGEPGQKGERGTIGPIGPEGPSGHIGERGPQGEVGPPGSPGEPAERGDPGPPGLI GEPGAPGNPGERGPHGLQGLQGFPGPQGLIGLPGLKGDRGYPGLKGEQGNPGLPGSPGEI GAPGPIGVTGAKGIRGDPGVRGEPGLMGPPGIIGHVGPSGPPGNIGSSGAPGLPGVKGDA GDTGRPGNPGPTGNPGLPGIDGIKGESGSPGSQGLTGSQGPQGPPGERGLSGLPGSPGPI GNRGLRGAPGEIGQPGKTGTEGPPGPPGLIGSPGAPGHTGEIGPEGPTGKPGPPGIGGRP GDKGPPGVPGAAGPSGPPGLSGPPGPIGPTGLTGERGPKGETGPQGVEGPQGPRGKPGPA GLEGIKGDHGEEGQKGAKGHRGFTGLQGLPGSPGLVGEKGIPGLPGLPGKDGEPGIRGNP GREGNPGPIGPVGNPGSRGPPGEEGRQGSPGLPGPPGPPGPPGEVGFGYDAASLAAFIGQ GQTKGPDPLGDEPPRIFSKDITEKERRELLLKAYENLKSSFQKLMKPDGEKNSPAKTCRD LFVAYPDKLSGEYWIDPNEGDIRDAILVYCDAEKRATCILPNPSRSPEITHITDQQETWL SEIDNGMKITYKADSNQIGFLQLLSKHANQNITYHCKNSVAYFDYEKKTYKRGLKLLAWN DVELTPRGNQRLRYEMIMDECRVYRNNWGKTVVSYETNKPVRLPILDVALRDIGKPEQSF SIEIGPTCYD NT seq 4533 nt NT seq  +upstreamnt  +downstreamnt atgagacggcgggctttagagctgatcacgggacttctcgtggttcagctgctgttgcct ttgccggatcaagtgaacgccatgaaaaacagactgaggaaacaacgatccaaaccgcaa gagcatcaggctcagcagtctagcaacgattatgaatatgattataactacgagaactat gacgaatacgatgaaaagaacgaaactacaacaatattaccatcacgtgcaatatcatca gatatcacgcaactttcggagagatccgaaataacaacagaagcatttttgaggcgagaa acacctacaaatttaccagctcctacgacaactcaattttatgatcatggtagatcagag gagactagttccacatctgctcgggattattcagttttacctacggagattttaccgggt gaaagtaacatatatagttctgtggctgtaccaggaccacgaggttcacctggtcgacct ggagatgatggtcgtcctggcgattcaggatatcctggacaacctggtacacctggaatc ccagggccacctggacctccaggacctgtacctgatgtatctctttattatcaacaattg gctttgtctcaagcaaatgaagataaaggtccgtccggtgcagcggcgtcattgtatgga ccagaggcattatcttacattcaggcacaagtaggcccgataggtccgcgaggtcctcca ggtccatctggtcctcctgggcctcaaggttttcaaggtatacgaggtgaaaccggtgaa ctgggttctccaggtcctcctggcatgccaggtcctaggggtttgccaggattacctgga aaagacggtatcagtggagaagatggcgaaactggtccactaggatcgcctggtcctgtg ggacaacgtggccttccaggaatacctggtcttccagggctgaaaggtcatcgtggtttt ccaggtctagacggtgccaaaggtgagcaaggaacttctggtgaaaaaggatctatgggc tcacctggaccgatgggaccagtaggaccaatgggtccagctggacctcgcggtgaaaga ggtagagaaggtccatcgggtcctcctgggttgagaggcctcgacggaattgctgggccg cctgggcaacctggtgttataggcaaacctggttcaccaggttttccaggaaatcctgga gttaaaggtgatcaaggaccgcaaggaccgacaggaaaccaggggttgcaaggcccgcga ggcgaaagtggccgtccaggacaacctggtgaaactggtccacaaggtcctcaaggcaaa gatggaattccgggtgagaaaggagccactggagcaataggacccgttggtatggtcggg tttccgggtgctcgaggtcaacctggaacaccgggtaatcctggtacccctggcgccaaa ggagcacctggccttcctggtgatagaggtttgaaaggagatactggagtgaaaggtgat tcaggaatgcctggtccgcgtgggcttccgggacctcctgggaatgagggcaaaagaggc aaaaggggtatgcgtgggccaatcggctctgtaggacctcctggagaacgcggcgtatct ggagaacgtggtttccctggatcggatggtcctatcggacctcaagggcaacctggtgat cgtggtcctctaggagctgttggatcaaaaggcgctactggagatcctggacgacccgga gcggcaggattacagggtgcacgtggtttaatgggtaggcccggagcctccgggaaacca ggtaatcctggggaacgtggaattcaaggtgcggatggcaagcctggagaacagggactg cctggattgcagggtctaccaggaccaatgggaacaccaggggaaagaggatattctgga gaacgtggaaaagatggtgagcctggcaatccaggtccacctggtccaagaggagacact ggtaaagaaggacctccaggagtacagggtccaccaggtccatcaggaagcgacggcgtg cgaggtcttccggggcccactggttctagaggttttcaaggtcttccaggtgccgccggt aatccgggtgttccaggcaaggatggagaagcaggagtacaaggacatcctggtccgccg ggaatggttggcgatagaggcgagcgaggacttccgggagaaagaggacttattggacct ccaggacctatgggacctagaggagaaaccggaacacaaggctctgacggtctcattggt ttaccaggactcaaaggagacaaaggaagtttcggttcaccgggattattaggacttcct ggcgcgagaggattatccggagaacctggacagaaaggagaaaggggtacaatcggacca atcggccccgaaggtccctcaggacatattggagagcgtggtccacaaggagaagttgga cctcctggctctcctggagaaccagctgaacgaggcgatccaggtcctcctggtctcatt ggcgagcccggagctcctggtaatccaggagaaagaggacctcatggattacaaggcttg caaggttttccaggcccacaagggttaattggacttccgggtctgaaaggtgatcgaggc tatccgggtttaaagggagaacaaggaaatccgggactacctggcagtcccggcgagatt ggagcacccggacctattggagttactggtgctaagggaatcagaggtgatcctggtgta cgaggtgaacccggtttaatgggcccccctggtattataggacatgttggaccatcagga ccaccaggaaatataggatcatctggtgctcctggattgcccggtgtcaaaggtgatgcg ggcgatactggacgtcctggaaatccaggtccaaccggtaaccctggtctacctggaatc gatggaattaaaggcgaaagtggatccccaggctctcaaggactaacaggttctcaagga cctcaaggtccgcctggcgaaagaggtttatcgggcctacctggttcccctggtcctata gggaatagagggttacgcggagctcccggtgaaataggacaacctggaaaaacaggaacg gaaggtccgcccggacctcctggattaataggttctccaggtgctccaggtcacacagga gaaataggaccggaaggaccaactggaaaaccaggcccaccaggtataggaggccgacca ggtgataagggaccacctggagtacctggtgctgcaggaccatcaggtcctcctggatta tctggaccacctgggcccatcggacctaccggacttactggagaacgtggtccgaaaggt gaaacaggaccgcaaggtgtggaaggtccacagggaccacgaggaaaacccggcccagca ggccttgaaggtataaaaggggatcatggggaagagggacaaaaaggagctaaaggacat cggggatttactggtttacaaggattacccgggtctcctggtttagtaggagaaaaaggt ataccaggtttaccaggacttcccggtaaagacggagaaccaggtattagaggtaatcct ggtcgagaaggcaatccaggtcctatcggacctgtgggaaatcctggatcaagaggccca cctggggaagaaggtcgccaaggatcaccgggtcttccaggaccacctggaccacctggt cctcctggagaagtgggtttcggttacgatgcggcgtctttagcagcatttataggacaa ggccaaaccaaaggaccagatccacttggagatgaaccaccaagaatatttagtaaagat attactgaaaaggaacgaagagaattacttttaaaagcgtacgaaaatttaaaatcgtcg ttccaaaaattgatgaaaccggatggtgaaaagaattcacctgctaaaacttgtcgagat ctatttgttgcttatccggacaaattatctggcgagtattggattgatccaaacgaagga gatattcgagacgcgatcttagtgtattgcgatgctgagaaacgtgcaacttgcatttta ccaaatccatcgcgttcaccagagatcactcacatcactgatcaacaggaaacctggttg agtgagatagataacggcatgaagattacatacaaggcagatagtaatcaaatcggtttc ttgcaattgctctcgaaacatgcgaatcagaacatcacgtatcattgtaaaaatagcgtg gcttactttgattacgaaaagaaaacgtacaaaagaggcttaaagcttttagcttggaac gatgttgaattgacaccacgaggtaatcagcgtcttagatatgaaatgataatggatgaa tgcagggtctatcgaaacaactggggtaaaactgttgtctcgtacgaaacgaataaaccc gtaagacttcctatattagacgtcgctctgcgagatatcggaaaacccgaacagagtttt tctattgagatcggtccaacttgttatgattaa

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