Trachymyrmex septentrionalis: 108753384
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Entry
108753384 CDS
T11226
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
tsep Trachymyrmex septentrionalis
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tsep03041
]
108753384
Spliceosome [BR:
tsep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108753384
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
ARM_TT21_5th
TPR_19
TPR_11
PPTA
HAT
Motif
Other DBs
NCBI-GeneID:
108753384
NCBI-ProteinID:
XP_018350419
UniProt:
A0A195F0W3
LinkDB
All DBs
Position
Unknown
AA seq
1061 aa
AA seq
DB search
MSSASGDEAEVALAEPVRRTRSGRARKTTVAKKPPVKKLLARATRFPRKVHENEEIEEET
TSMLEEEVIESMPENGVPRVIDIIMEQRSDEDSSTLHLQLEDSEDTNIQEMNMDQNEEIE
QDVEEIEHSNIRSEGIIMEESSMDKVEILAERGDIKVEGQDVQLECQDVEMEGQDISNDD
SNQRVLIDFQEVINEDGNTMTQEILEAEEVDDSENMSTHTGTRIQVMEIDEQEISEDVET
VETVETVEAVETVMDKIEEPEMEVSQSDSLPRIEITAVENEETEEIQEYITEDDTKKIGP
DTEAVSEDELPTEAAAKEPETEAVSDEELPVAAAADLGETESVSEDELPPDSDKKRKHGA
KSIKTLEKKTKAEGGTKRKLNAEGEYDPSSPTSENNDEAPAKKVALSSDAEAGDKQEIKP
ASPKKKTLPELEKYWKAVNEDPSDFTGWTYLLQYVDQENDAEAAREAYTKFLERYPYCYG
YWRKFADYEKKKGNPENVQTVFDQGLKAISLSVDLWLHYINHCKTVYEKDEEKLREQYER
AIQACGLEFRSDRLWESYIKWESEGKRLSRVTALYDRLLSTPTLGYTSHFEAFQEFVSSN
LPNRILSVDDFLALRAEVKALLKSDDATATSAADDAPPGEEPPPHEVPPTDEETRAIREK
IISSRRKMHKANVNAVAARWTYEEGIKRPYFHVKPLERCQLKNWKEYLDFEIEQKDQNRI
IILFERCLIACALYDEFWMRFVRYLESLKGDNTEKIRDVYSRACMVHHPKKPNLHLQWAI
FEEGQDNFETAATILENIDNVLPNMLQVAYRRINLERRRGDLEKACILYENYITNSKNRT
IANNIAVKYARFLCKVKDDVDKAIKVLMKATEKDKDNPRLYLQLIDLAMQRTPVDTQEIV
GYMDMFIEREHADLEQRVLFAQRKVEFLEDFSPDIRQVLKAHEQFQKCIKQAKERKKTKS
DDNKTDSSPPKKKTDQSNVPPSPSVGSQSSYQYSSGPSGPYQSQQQFQGGQYGGQGGYQQ
GYQQYPPPSDPNYANYQNWQYGQGGPQAYGPYNQWGSYNYY
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcagcgagcggtgatgaagccgaggtcgctttggccgaaccagtgagacgcacc
agatcgggtcgggcccgaaaaacaacagtagccaagaaaccacctgtgaagaagcttctc
gcccgggcgacgcgctttcccaggaaggtccacgagaatgaggaaattgaagaagagact
acatctatgttggaagaggaggtgatagaaagtatgcctgagaatggagttccacgtgtg
atagacattatcatggaacagcgtagcgacgaagattcttccacattgcatttgcaatta
gaggattctgaagacactaatatacaggaaatgaatatggatcaaaatgaagaaatagaa
caagacgttgaagaaatagagcattccaatataagatcagagggcataattatggaagaa
agtagtatggacaaagtagagatactggctgaacgtggagacatcaaggtggaaggtcaa
gatgtccaattggaatgtcaagatgttgagatggaaggtcaagacatcagtaatgatgac
tcgaatcaacgtgtgttgatagattttcaagaagttatcaatgaagatggcaacacaatg
acgcaagagatcttagaagcagaggaggttgatgattcagagaacatgtcaacacatact
ggtactaggatccaagttatggaaattgacgagcaagaaatatcagaagatgtggaaaca
gtagaaacagtggaaactgtagaagcagtggaaacagtgatggataagatagaagaaccc
gaaatggaagtgtcacagagtgattccctaccgcgtatagaaataactgcagttgaaaac
gaagaaactgaagaaatacaagaatatataactgaagatgatacaaagaaaatcggacct
gatacagaggctgtatcagaggacgagttaccgactgaagctgcagccaaggaaccagag
actgaagcagtttctgacgaagagctgccggttgctgctgcagcagacttgggcgaaact
gagtctgtatctgaagatgaattgccaccagacagcgataaaaaaagaaagcatggggcg
aaatcaataaaaacattggaaaagaaaactaaagcagaaggcggaactaaacgtaaatta
aatgcggaaggagaatatgatcccagttctccgacgtctgagaacaatgacgaggcaccg
gcaaaaaaggttgccttatcgagcgacgcagaagcgggagataagcaagaaatcaagcca
gcatcgccaaaaaagaaaacattgcccgaactagaaaaatattggaaagccgttaatgaa
gatccatctgactttacaggatggacgtatctcttacaatacgtggatcaagaaaatgat
gcagaggctgcgcgcgaagcttacaccaaattcttggagcgttatccatattgctacggt
tactggagaaagttcgctgattatgagaagaagaagggcaaccccgaaaatgttcaaacg
gttttcgatcaaggtctgaaagctatttcgctaagcgtcgacctctggctccattacatc
aaccactgtaaaaccgtctatgaaaaagatgaagagaagctccgggagcagtacgaacga
gccatacaagcttgtgggcttgaattcagatcggatcgtctttgggaaagctacataaag
tgggaatcagagggaaaacgtttgagcagagtgacagcgctatacgatcgtttattgtca
acacctactcttggttacacctctcacttcgaagccttccaggaatttgtgtcgtccaac
ttgccaaatcgtatcctaagtgtggacgatttccttgccttacgcgctgaggtaaaggct
cttctcaaatcagatgatgccactgcgacgtccgctgcagatgacgcaccacccggcgag
gaaccaccgcctcacgaagtaccacctactgatgaggagactcgtgccatccgtgagaag
ataattagcagcaggcgcaaaatgcataaagcaaacgtcaatgcggttgcagcgagatgg
acgtacgaagaagggataaagagaccatatttccatgtaaaaccattggaacggtgtcag
ttgaaaaactggaaggagtacctagatttcgagattgaacaaaaggatcaaaatcggata
atcattttattcgagaggtgtcttatagcttgtgcactttatgatgaattttggatgcga
tttgtacgctatttggaatcgctgaagggagataacacagaaaaaatccgagatgtgtat
tcgagagcttgtatggtacatcatccaaagaaaccgaatttgcacttgcaatgggctatc
tttgaagagggtcaagataatttcgagacagctgctactatattagaaaatattgataat
gtattaccaaatatgctacaagtggcataccgtcgaataaatctggaacgccgtcgtgga
gacttagaaaaagcatgtatcttatatgaaaattatattactaatagcaagaatagaacg
attgctaataatattgctgtaaaatatgcgcgatttttgtgtaaagtcaaggatgatgtc
gacaaggcaattaaggtgttaatgaaggccacagaaaaagataaagacaatcccaggcta
tatttgcaattaatagatctggcaatgcaacgaacgccagttgatactcaagaaatagta
ggctacatggatatgtttatagaaagagaacatgcagatcttgaacaaagagtgcttttt
gcgcaacgtaaagtagaattcttggaagatttcagtcccgacatccggcaagtcttgaag
gctcacgaacaattccagaaatgcatcaagcaagcgaaagagagaaagaagacaaagagt
gacgacaacaaaaccgattcttcgcctccaaaaaagaaaaccgaccagtcgaatgtacca
ccttcaccatccgtgggttcgcagtcttcataccaatacagtagcggcccgagcggtcct
tatcaatcacaacaacagtttcaaggtggacaatatggtggtcagggcggttatcaacaa
ggttatcagcagtatccacctccatcagaccccaattatgctaattatcaaaattggcag
tacggtcaaggtggaccacaggcttatggaccttataaccagtggggatcttataattat
tattaa
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integrated database retrieval system
