Trachymyrmex septentrionalis: 108753539
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Entry
108753539 CDS
T11226
Name
(RefSeq) synaptobrevin-1 isoform X1
KO
K13504
vesicle-associated membrane protein 2
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108753539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsep04131
]
108753539
Membrane trafficking [BR:
tsep04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
108753539
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
108753539
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Synaptobrevin
MCU
ODV-E18
CD34_antigen
LMBR1
Pex24p
Orf78
DUF5345
TMEM132_C
Seryl_tRNA_N
DUF1129
Tweety
Motif
Other DBs
NCBI-GeneID:
108753539
NCBI-ProteinID:
XP_018350701
LinkDB
All DBs
Position
Unknown
AA seq
125 aa
AA seq
DB search
MSIMTMEGGGAGGEMGGPHNPQQAGASKKLQQTQATVDEVVGIMKVNVEKVLERDQKLSE
LENRADALQQGATQFEQHAGKLKRKYWWKNLKMMLILGIICVIILIIIIASVVPSSSSDS
DNAPK
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atgagtattatgactatggagggtggtggtgcaggaggagaaatgggcggaccgcataac
ccccagcaagcgggtgcaagcaagaaactgcagcagactcaggccactgtagatgaggtt
gtaggtataatgaaggttaacgtggagaaggtgctggagcgagatcagaagctgtcggag
ctcgaaaaccgtgcagatgccttacaacaaggcgcgacgcaattcgaacaacatgccggc
aaattgaaacgaaagtactggtggaagaatctgaaaatgatgctcatccttggcatcata
tgtgttataattttaatcatcattattgcttcggttgtgccaagttcgtcttcagactct
gataatgctccaaaatga
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