Trachymyrmex septentrionalis: 108753823
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Entry
108753823 CDS
T11226
Name
(RefSeq) vacuolar protein sorting-associated protein 35 isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108753823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsep04131
]
108753823
Membrane trafficking [BR:
tsep04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
108753823
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
DUF3896
FerA
Motif
Other DBs
NCBI-GeneID:
108753823
NCBI-ProteinID:
XP_018351244
LinkDB
All DBs
Position
Unknown
AA seq
812 aa
AA seq
DB search
MVSLFFSQPMTPAITGMEEQEKLLEDAIGVVKVQAFQMKHCLDKSKLMDALKHASTMLGE
LRTSLLSPKSYYELYMAITDELRHLELYLLDEFQKGRKVTDLYELVQYVGNIVPRLYLLI
TVGLVYIKTTPGLKRDLLRDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDVTEGDDEDG
TVRDSIDFVLMNFAEMNKLWVRMQHQGHSRDRERREREREELRILVGTNLVRLSQLESVT
LDKYKKLVLPGILEQVVSCRDAIAQEYLMECIIQVFPDEFHLQTLNAFLKSCAELQNGVN
VKNIIISLIDRLAAFSQRSDGVGGPGSPNQVPGIPQDVKLFDVFSDQIATIIQTRQDMPP
EDIVSLQVALINLAHKCYPDRVDYVDKVLFTTVQIFQKQNVDKLEYNSAVSRELVRLMKI
PVDNYKNILTVLKLEHYAPLLDYFDYEGRKSLAIYIITNILENETLIPMQEQVDAVLFMV
SSLVQDQSDQPNIEEDPEDFAEEQGLLGRLIHHFRSETPDQQYMILSAARKHFSAGGNKR
IKFTLPPIVFQSYQLAFTYKALKDQDDMWQKKCQKIFQFCHTTITALMKAELAELPLRLF
LQGAIAIGEIRFDNFEMVAYEFMSQAFSIYEDEISDSKAQLAAITLIIATFEQMSCFGEE
NAEPVRNQCALYASKLLRKPDQCRGVATCSHIFWSGKSLATGGKEMQEGGKVLDCLKKGI
RIASQCMDTSVQVQLYVELLNHYIYFYEKGNTAVTVQILNQVIAKIREELPNLEASEETD
QIQKHLANTLEHLRNRMESPDSDGLSYQGLIL
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggtatctttgtttttctcgcagccaatgacacctgctataacgggaatggaggaacag
gagaaattgctagaagatgcaattggagtggtaaaagtccaagcttttcagatgaaacac
tgtctggacaaatccaaactaatggatgcgctaaaacatgcctctaccatgttgggagaa
cttaggacttcccttctaagtccaaaaagctattatgaattatatatggcaatcacagat
gaattacgacacttggaactttacttgttggatgaatttcaaaaaggaagaaaagttacc
gatctctatgaattggtacaatatgttggcaatattgtacccagactgtatttacttatc
actgttggcctggtttatatcaagacaacgcctggtttgaaaagagatcttctgagagac
cttgtagaaatgtgtagaggcgtgcaacatccactgcgtggtttattcttaaggaattat
ttgttacaatgcacaaggaatatcttgccagatgtcaccgagggtgatgatgaagatgga
actgttcgtgacagcatagattttgttctgatgaattttgcagaaatgaataaattgtgg
gtacgtatgcaacatcaaggtcatagtagggacagagaaagaagagagagggaaagggaa
gagcttcggattctagttggaacaaatcttgtacgacttagtcaattggaatctgtaaca
ttggataaatacaaaaagcttgtattaccgggaatcttggagcaagtcgttagttgtaga
gatgcaatagcacaggaatatcttatggagtgtataattcaagtctttcctgatgaattc
catttacaaacgttaaatgcatttctgaagtcgtgtgcagaattgcaaaatggagtaaat
gttaaaaatataattatatcattaattgatcgacttgcagccttcagtcaacgatccgat
ggtgtaggaggaccgggaagtccaaatcaagtgccaggaattccacaagacgtcaaactg
tttgacgtatttagtgatcaaattgcaactatcatacagacaagacaagatatgcctcct
gaagatattgtgtccctccaagtggctcttataaacttagcacataaatgctatcccgat
cgtgtggattatgtagataaagttttgtttacaacagttcaaatatttcagaaacaaaac
gtcgataaattggagtacaatagtgctgtttcaagagaactagttagattaatgaaaatt
cccgtagacaattataaaaatatattaacagtgcttaagcttgaacactatgcgcctctt
ttggattatttcgattatgaaggcagaaaatcactagctatatatataataacgaatatt
ttggagaatgaaacgttgattccaatgcaagagcaagtagacgcagtgctcttcatggta
tcttccttggtgcaagatcaatcagatcaacctaatatagaagaagatcctgaagatttt
gccgaagaacagggattgctcggaagattaatacatcattttagatcggaaacaccagat
cagcaatatatgatactaagcgctgcaaggaaacatttcagtgctggcggtaacaaaaga
ataaaattcactctacctcccatagttttccaaagttatcaattagcatttacatacaaa
gcactgaaagatcaggatgacatgtggcaaaaaaagtgtcaaaaaatttttcagttctgt
cacacgactatcacagcattgatgaaggctgaattagccgaactacccttaagactattt
ctacaaggtgcaatagcgatcggtgaaattcgttttgataatttcgaaatggttgcttat
gaattcatgagccaagcattttcgatatatgaagatgaaataagtgattcgaaagctcag
ctcgcagctattaccttgatcattgctacattcgagcaaatgagttgttttggcgaagaa
aacgcagagcctgtacgcaatcagtgcgctttatatgctagcaaattattgagaaagcct
gatcagtgtagaggagtcgctacttgttcacatatattttggtctggaaaatctttggct
acaggcggaaaagagatgcaagaaggcggcaaagtgttggactgcttaaaaaaaggtatt
aggatagcaagtcagtgcatggacacttctgtgcaagtacaactgtacgtggagctgctg
aatcattacatttacttctacgaaaaaggaaacacagctgtaacggtgcaaatattaaat
caagtgattgctaaaattagagaggaacttcccaatctggaagcgagcgaagaaaccgat
caaatacagaaacatttagcaaatacgttagaacatttaagaaataggatggaatcgcca
gattccgatggactttcttaccaaggtctcatcctttaa
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