Trachymyrmex septentrionalis: 108753828
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Entry
108753828 CDS
T11226
Name
(RefSeq) uncharacterized protein LOC108753828 isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03015
mRNA surveillance pathway
tsep04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108753828
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108753828
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tsep01009
]
108753828
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsep03019
]
108753828
03036 Chromosome and associated proteins [BR:
tsep03036
]
108753828
Protein phosphatases and associated proteins [BR:
tsep01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108753828
Messenger RNA biogenesis [BR:
tsep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108753828
Chromosome and associated proteins [BR:
tsep03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108753828
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EF-hand_13
P2R3B_EF-hand
EF-hand_7
EF-hand_5
EF-hand_6
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
108753828
NCBI-ProteinID:
XP_018351250
LinkDB
All DBs
Position
Unknown
AA seq
1233 aa
AA seq
DB search
MPAIRITISQQSSKISSSLFSTEITELQQSPSLSSPTSLSWDCQVYATRRNLFVSAIVDL
RSSKAVHCSNLNACLVNESRSGYDRVNCQTIHFGYAIPINIVPIQKNPELVGLILDQSIK
LNNQIVNFLLDHSQLRQQQCFYDMAATAKHDLRRKFPTDSSASGEEDIAAIAKQISDHAE
AIYQTWKSRGLAPTEILTCHSNTTAVDKFGSTLTPCNSPTIGHAMTGNNIGDKMSSPSLE
HSSPTAVDILNSPNLDNGNLEKLVNNFVVEDKARIAASKQKLPSKPLPSSIQFALQKFEK
NSIQQQQMAVATKNNIIADNSKKLSSVLLSPTLSFLNKSSQIIKPQVCMKTSGSHHCEVF
LETIETTFPVDLTSSNRMIQQKRPTSTLITSSSIDSSLNINSSHSTTSGLTTWPLKNKLN
DVKKITDVSLTSAKISQQEDITKTVPGQNEKKSVMTHLNSQCAYLDEVAREEERLINALK
TGVVITEEPERTEITCLRNKQKPAIKQEKPKVEPVKQIIIGGHYYKNNSIVSNSGTSSSM
VNIINNDNVGTAATVPTSHIALVNSAKSFSKDDLSAMSAVDYAKARYQAAQENPPTQQRL
EEQRASNNTYNSCTTEQLVSSVKTKFEMEIQKDKDVKDLDKHSMTSRWGSKITSSRPRLE
QAVPHPELTNQQKQHIRTAVTTGTGNNPVRPFLTRGSVAERVLIFEKCPSELLLDKRGPR
QPTINTLSGGHEVQNKAQIYSREKTQQKSLPPHTTLQRQVKANRSVHIPRFYFPGGKPLP
LSQLEIIISKITAAFQSLPNCRASQAQFHIITKACDVPLYWKIPLFLAADGDQKGFVEMN
VFLEFWKKLTTIHHDTANKFISIVTRGLRNNILPEDLIPLVQDVVETHPGLTFLKEATEF
HSRYVHTVIARIFYCVNRSWSGKISIAELRRSNLLAMIAMLEHEEDINQVTAYFSYEHFY
VIYCKFWELDRDHDLFIDKIDLTRHNDHALSTRMIERIFSGAVTRGGKIKNSNDAQQTEG
KMSYTEFVWFLLSEEDKNHPTAIEYWFRCMDLDGDGYLSMYELEYFYEEQLRRMEAIGLD
TLPFEDCLCQMLDMIHPVIPGKISLNDLKKCKMTSIFFDTFFNLEKYLDHEQRDPFASTR
DHDPDGQELSDWDRFAAEEYELLVAEESGNEQQEQMLHTIVSWKLSPNVDILINNSVDMV
KDSNSLMNSLDIHMQQSRHDSGDTDTDYADSDN
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgccagcgataagaataacaatatctcaacaatcctcaaaaatatcttcatcgctattt
tcaactgaaataacggaattacagcaatcaccatcattgtcgtcgccgacatcgttgtcc
tgggattgccaggtttacgcgacacgacgtaatctttttgtatcagcgattgtcgattta
cgttcaagtaaggcagtgcattgttcaaatttgaatgcctgcttggtaaacgaatcacgt
tcaggatatgatcgagtgaactgtcaaacaatccattttggttacgcgattccaattaac
atcgtgcctattcaaaagaatcccgagttagtcggattaatattagatcaatccatcaaa
ttgaacaatcaaattgtaaatttcctactcgatcattcgcaattgcgtcaacaacagtgt
ttttatgatatggctgccacagccaaacatgatttacgtcgaaaatttcctacagattcg
tctgcttccggcgaggaagacatagccgcaattgccaagcagatcagtgatcatgcagag
gcaatttatcaaacatggaaaagccgtggattagcaccgacagagattttaacttgtcac
agcaacacaactgctgttgataaatttggtagcacgttgacaccttgcaattcacctact
attggacatgctatgactggaaataatattggcgacaagatgtcatcgccatcactcgaa
cattcttcgccaacagcggtagatatattaaattcgccaaatctagacaatggcaatctc
gaaaaactagtcaataattttgtagtagaggacaaagctagaatagctgcttctaaacag
aaattaccatctaagccgttaccatcttccatacaatttgccctgcaaaaatttgagaaa
aactctatccaacaacagcaaatggctgttgcaacaaagaataatataattgcagataac
tcaaagaaattgtcaagtgtcttactatctcctaccttatcatttttgaacaaatcatca
caaataataaaacctcaggtttgcatgaagacgtctggctctcatcattgcgaagtcttt
ctagagactatcgaaactactttcccagttgatttgacatcttccaatagaatgatacag
caaaagagacccactagtacattaatcacatcatcatccattgattcctcgttaaatatt
aactcatcgcattcgaccacttcaggtttgacaacttggccattaaaaaataaattaaat
gatgtcaaaaaaattacagatgtatctctcacgtcagctaaaatatctcaacaagaggat
attacaaaaacagtgccaggacagaatgagaaaaaatcagtcatgacacatttgaactca
caatgtgcgtatctcgacgaagttgcacgagaagaagaaagactgataaatgctttaaaa
acaggtgttgtaatcactgaagaaccagagaggacagagataacatgtttgcgcaataaa
cagaaaccggctattaaacaagaaaaaccaaaagttgaaccggtcaaacaaattattatc
ggaggccattattataagaataattcgatagtatcgaattcgggaacttctagttctatg
gtaaatataatcaataatgacaatgttggcactgccgccactgtacctactagtcatatt
gcattagttaatagtgcgaaatcattcagcaaggatgatttgtctgctatgtcggcggtt
gactatgctaaagctagatatcaggccgctcaagaaaatccacctacccaacaacgactt
gaggaacaacgagcttccaacaatacgtataatagttgtaccacagagcaattggtttcc
agcgtaaaaacgaaatttgagatggagatacaaaaggacaaagatgttaaagatttagat
aaacactcaatgacatctagatggggatcaaaaattacttcttcacgaccacgtctagag
caggctgtacctcatccagaattaactaatcaacaaaaacagcatataagaacggctgtg
acgacaggaacgggcaataatcccgtccgaccgttcctcacaagaggctccgtggcagag
cgtgtactcatttttgagaaatgcccaagcgaactgctgttagacaaacgtggtccacga
caaccgaccattaacacattgagtggtggccatgaggtgcaaaataaagctcagatttac
tcgagagagaagacgcaacaaaaaagtttgccgccacatacaactttacaaagacaagtg
aaagccaataggagtgttcatataccaagattttattttccaggagggaaaccacttcct
ctctcacagttagagataattatctcaaaaattactgcggcctttcagagtttaccaaat
tgtcgcgcttctcaagcacaatttcatattatcacgaaggcttgtgatgtacccttgtat
tggaaaataccacttttcctggcagcagacggtgaccaaaaaggatttgttgagatgaat
gtctttctagaattttggaaaaaactaacaactattcatcacgatactgctaataaattc
atcagtatagttactcggggtcttcgaaacaatatactccctgaggacctgataccactt
gtacaagatgtagtagaaacacatccaggattgacatttttaaaagaagctacagaattt
cattctcgctacgtacacacggtaattgctagaatattttattgtgtgaatcgaagttgg
agcggtaaaatttcaattgcggaattaaggagaagtaatttattggcaatgattgctatg
cttgagcacgaggaagatattaatcaagttacagcgtacttcagctatgaacacttttat
gtgatatattgcaaattctgggaattggatcgcgatcatgatctctttatagataaaata
gatttaacaaggcataatgatcatgcgttatctacccgaatgattgaacggatatttagt
ggtgctgtgacgagaggtggtaaaataaaaaacagtaacgacgcgcaacaaacggaaggt
aagatgagttacacggagtttgtgtggttccttcttagtgaagaagacaagaatcatcca
actgctattgaatattggtttagatgtatggatctcgatggtgatgggtacttatcgatg
tacgaattggaatacttctatgaagagcaattacgtcgaatggaagcgattggtttagat
acattgcctttcgaagattgcctttgtcagatgttggatatgattcatccagtgatacca
ggcaagatatcattaaatgatttgaaaaaatgtaaaatgacatccatcttctttgatact
tttttcaatttggaaaagtatctagatcatgaacagagggatccttttgcttccacaaga
gaccatgatcctgatggccaagaactctcagattgggatcgatttgcagcagaggaatac
gaattattagttgccgaagaaagtggcaatgaacaacaagaacaaatgttacacactatt
gtctcctggaaattatcgccaaatgtggatattttaatcaacaactcggtggatatggtc
aaagattcaaattcattgatgaattcgttggatattcatatgcaacagtcgagacatgat
agtggagatactgatactgattacgctgacagcgataattaa
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integrated database retrieval system
