Trachymyrmex septentrionalis: 108754314
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Entry
108754314 CDS
T11226
Name
(RefSeq) WD and tetratricopeptide repeats protein 1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
tsep
Trachymyrmex septentrionalis
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsep04121
]
108754314
Ubiquitin system [BR:
tsep04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
108754314
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_Gbeta
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
TPR_19
TPR_1
TPR_17
DSE1_N
TPR_11
Beta-prop_SCAP
Beta-prop_TEP1_C
ANAPC3
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
Beta-prop_Aladin
Beta-prop_SPT8
Beta-prop_WDR19_1st
NBCH_WD40
TPR_6
CFAP70_TPR_C
Beta-prop_RIG_2nd
TPR_16
PAC11
TPR_BSK1_C
ETO1_C
Motif
Other DBs
NCBI-GeneID:
108754314
NCBI-ProteinID:
XP_018352027
UniProt:
A0A195EXJ3
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MFPNIQKKDYRVLDLIRQREIQDSVTHMILQKLHVTENLISRLGLEKELNGHSGCVNCLE
WNETGQVLASASDDKDIILWDPFRYEKKLVLHSGHRGNIFSVKFMPKSNDSVLVSGAADC
RIRVHDLTLSEPIFTCKCHKQRIKRIATVPSIPFLFWSAGEDGLFLQYDIRTPHVCKSND
HSVLVNLVYHTGCYAEGKCIAVNPRKPELIAIGANDAYIRMYDRRMIKLSQVPPSPSIHD
NSNGANISTYRAGKGDPDDNIPLGSAQYFIAGHLRSRDGTRSITTTYLTFSDDGNELLVN
MGGEQIYLFDINDSNSSKKIFGSSWRSPGSIEQEQRLDEYYMKQNDIDEAGDFVDKNVKI
LPPHVEEIKRLANEGFEQQKYSLAINLYNKAISNCPTAAVLFANRAAAYMKRAWDGDIYA
ALRDCKTTLLLDPEHVKAHFRLARCLFDLNRPIEADKVLKSFKQKFPEYASNSACRALKM
DIKEAIDAGKDITQTRQTFLPLSEYEQEWRHNTIDYKMRFCGHCNTTTDIKEANFFGNNG
QYIVAGSDDGSFFIWDRNTTNIVRVLRGDERIVNCLQPHPSMCLLATSGIDPVIRLWSPW
PEDGSVNEREIQNLDDAASANQIRMNSDPFELMLMNMGYRFPVPQHEFSDEDSEDQHDQP
ITQALNCRPS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgtttcctaatatccagaagaaggactatagagtcctagatttaatacgtcaaagagaa
atacaagactcagtgacacatatgattttacaaaaactacatgttactgaaaatttgata
tcacgtctgggtttagaaaaagaattaaatggtcattcagggtgtgtcaattgtttagaa
tggaatgaaactgggcaagtgcttgcgtcagcatcagatgacaaagatattatattgtgg
gacccttttcgttatgaaaaaaaattggtacttcattcaggccatcgtggaaatattttc
tctgtaaaatttatgccaaaatcaaatgacagtgtactggtgtcaggtgcagccgattgt
agaattcgagtacacgatcttacactctccgaaccaatatttacgtgtaaatgccacaaa
caacgtattaagcgtatcgctaccgttcccagtataccatttttattttggagcgctgga
gaagatggtctctttttgcaatatgacattcgtacaccgcatgtttgcaagagtaatgat
catagtgtacttgtgaatctggtatatcatacgggttgttatgcagagggcaagtgcatt
gctgtgaacccgaggaaacctgaactaattgctatcggtgctaatgacgcttacatccga
atgtatgatcgacgaatgataaaactctcgcaggttcctccatctccttctatacatgat
aattcaaatggggcaaatattagcacgtatcgagcaggtaaaggggatccagatgacaat
attccactgggtagtgcacaatactttattgcgggtcatctccgctctcgtgatggtacc
aggagcattacgaccacctatttgacattcagcgacgatggaaatgagttactcgtgaat
atgggaggagaacaaatttatttatttgacatcaacgattcgaatagttcgaaaaaaatt
ttcggttcatcctggagatctccaggatcgattgagcaagaacaaagacttgatgaatat
tatatgaaacagaacgatatagacgaagcaggagattttgtagataaaaatgtaaagata
ttgccaccacatgttgaagaaataaagcgccttgcaaatgaaggctttgaacagcagaaa
tattcattagcaattaatttgtataataaagcaatttcaaactgtccaactgcagcagta
ttgtttgctaatcgagcagctgcttatatgaaacgcgcttgggatggtgatatttatgct
gctttacgagattgtaagacaacattacttcttgatccagaacatgtaaaagctcatttt
agattggcacgttgcctatttgatttaaatcgaccaattgaagcggacaaggtgcttaag
agttttaaacaaaaatttccagaatatgcatctaattcagcatgtagagcgttaaagatg
gacataaaggaagctatcgatgccgggaaagatatcacccaaactaggcagacattcctt
ccactatcagagtatgagcaagaatggaggcataatacaatcgactacaaaatgagattt
tgtggacattgtaatactacaactgacataaaagaagccaacttcttcggaaataatggt
caatacatagtggctgggtcagatgatggttccttttttatctgggatcgtaatactacc
aatatcgtacgtgtgttgcgaggagatgaaagaatcgttaattgtttacaaccacatcca
tccatgtgcttgttagctactagtggcattgatccagtgatcagattatggagtccatgg
ccagaggatggtagtgtgaatgaaagagaaattcagaatctagatgatgctgcatcagcc
aatcaaatacgcatgaacagcgatccatttgaattaatgctcatgaacatgggatacaga
tttcccgtccctcagcacgaatttagcgacgaagacagtgaagatcagcatgatcagcca
ataacacaagctttaaattgtagaccaagttaa
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