Trachymyrmex septentrionalis: 108754328
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Entry
108754328 CDS
T11226
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
tsep Trachymyrmex septentrionalis
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsep04131
]
108754328
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tsep04812
]
108754328
Enzymes [BR:
tsep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
108754328
Membrane trafficking [BR:
tsep04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
108754328
Cytoskeleton proteins [BR:
tsep04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
108754328
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
MIT
RuvB_N
AAA_5
AAA_22
TIP49
AAA_16
NPHP3_N
AAA_14
Mg_chelatase
DUF815
IstB_IS21
nSTAND_NTPase5
nSTAND3
Motif
Other DBs
NCBI-GeneID:
108754328
NCBI-ProteinID:
XP_018352057
LinkDB
All DBs
Position
Unknown
AA seq
717 aa
AA seq
DB search
MSCSDGARPTRKFGTKSPKKLCVTKSENGDKTTTTISCVGHRHNHHYHHGHHRFLDGSSQ
PSVHKRNLYIVSFPLILLFNVLRTLLYQLFVVFKYLYTSTSQLIQRRQTSKQACQLEIVV
GQKPTDGRLINGNRIEGEAMSQVPRRPIGPGPGDPLLAKQKHHHRRAFEFISKALKIDED
NEGQKEMAIELYKKGIGELEKGIAVECTGGHGEVWEHAQRLHDKMCTNLAMAKDRLDFLV
SVRELRKLGINNNINNRAPGNKTDGEHPGKHLRARRNTHTFQNARTSPNINHNKNTNNIH
TTINAGQTMCTQIPKLRPRSPKNCFAHTIEASGRKLSVPGKRIIGTPLSKSQTLPRSMGR
SMPIQPCHRTMPIKPSSTPPSVKRQLSVPGNGSPIRRPGTPTTSNSNRSTPTRKVPILKG
VDPKLAQVILDEILEGGAPVQWEDIAGQETAKQALQEMVILPSLRPELFTGLRTPARGLL
LFGPPGNGKTLLARAVATQCNATFFSISAASLTSKYVGEGEKLVRALFAIAREFQPSVIF
IDEVDSLLSERKDNEHEASRRLKTEFLVEFDGLPCNPEERVLVMAATNRPQELDEAALRR
FTKRVYVTLPDSQTRIVLLRRLLAKHNDPLTLEELNEMAVLTEGYSGSDLTGLAKDAALG
PIRELNPDQVKELDLNSVRNITMQDFRDSLKRIRRSVSPASLAAYEKWNFEYGDVSL
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgcagcgatggcgcgcgcccgacccgtaagttcggcacaaaatcgccgaagaag
ctgtgcgtgaccaagagcgagaacggcgacaaaaccacgacgaccattagctgtgtcggc
caccgtcacaatcatcattatcatcacgggcatcatcgcttcctagacggctcctcgcag
ccctcggtacacaagcgcaatctctatatcgtctcctttcctctgatactcctgttcaat
gtgctgcgcactctgctgtatcagttgtttgtggtgttcaagtacctgtacacctccacg
tctcagctgatacagcgcagacagacgtccaaacaagcctgtcaattggagattgtcgtg
ggacaaaagccaacagatggacgtttgatcaatggtaatcggatagaaggcgaggccatg
tcgcaagtgcctagacgtcctatcgggccaggacccggggatccattgctagctaagcaa
aagcaccatcatcgtagagcgtttgaatttattagcaaagcactcaagattgacgaggat
aatgaaggacaaaaggaaatggcgatagaattgtacaaaaagggaattggagaattggag
aaaggaatagccgtagaatgtactggtggacacggcgaagtatgggagcatgcgcaaaga
cttcacgacaagatgtgtacgaatctggcaatggcaaaagacaggctcgatttccttgtg
agtgtgcgtgagctgagaaagctgggtatcaacaataatatcaacaatcgcgcacctgga
aataaaacggacggcgaacatccgggaaagcatctgagggctcgccgcaacacgcacact
tttcaaaacgctcgaacttcacccaacattaatcacaataagaacacaaacaatatacac
acgacaattaacgctggacagactatgtgtacccagattcccaagttaaggccacgttca
ccaaaaaactgtttcgctcatactattgaagcatctggtaggaaactatcggtccctggt
aaacgaataataggaacacccctaagtaagagccagacattgcctcgaagtatgggtaga
tcgatgcctattcaaccttgccacagaaccatgcctatcaaaccgtcctccacaccaccc
tctgtaaaaagacaactgtctgtaccgggcaacggttcacctataagacgtccaggaaca
ccgaccacttcgaacagtaacaggagtacgccaacgagaaaagtacccattttaaaaggt
gtagatccaaaactcgcgcaagtgattctcgatgagatcttggaaggaggagcaccagtg
caatgggaagatattgctggccaagagaccgcaaagcaggctttacaagagatggtaatt
ctaccatcgctaagacctgagctatttaccggtctgcgaacacccgcgagaggattatta
ttgttcgggccacctggaaacggaaagacattgttggcgcgcgccgttgcgactcaatgc
aacgcaacatttttttcgatttctgcagctagtctcacgtcaaaatatgttggagaaggt
gaaaaattagtgagagctctgtttgccattgctcgggaatttcagccctctgttattttc
atcgatgaagtggattcattattgagcgagcgtaaagataacgagcatgaagcttcgagg
aggctaaaaacagaattcttggtcgaatttgacggtttgccgtgcaatccggaagaaaga
gtactcgttatggctgctacaaatagaccgcaggaattagatgaggctgcattaaggcga
ttcacaaaacgcgtgtatgttacattacctgactcacagacgagaattgtgttactccga
agactcttggccaaacacaatgatccattgacgcttgaagagttgaatgagatggcagtt
ttgacggaaggatactcgggaagcgatttgactggactagctaaagacgcagcacttggg
cctattagagaattgaatccagatcaggtgaaagaattggatcttaattccgttcgtaat
atcacaatgcaagatttccgtgattctctaaagagaattcgtagatccgtttcaccggca
agtctagctgcctatgagaaatggaactttgaatatggagatgtgagtctttga
DBGET
integrated database retrieval system
