Trachymyrmex septentrionalis: 108754502
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Entry
108754502 CDS
T11226
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108754502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsep03019
]
108754502
Messenger RNA biogenesis [BR:
tsep03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
108754502
U7-dependent histone pre-mRNA processing factors
108754502
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_10
RRM_7
DUF908
DUF8400
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
108754502
NCBI-ProteinID:
XP_018352345
LinkDB
All DBs
Position
Unknown
AA seq
476 aa
AA seq
DB search
MSNSTISDQTLMDKSMRSVFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGY
GFCEYKDQETALSAMRNLNGYEIGGRTLRVDNACTEKSRMEMQSLLQGQSTENPYGEAVQ
SDKAPEAISKAVASLPPEQMFELMKQMKLCVQNNPNEARQMLLQNPQLAYALLQAQVVMR
IVDPHTAVSMLHKANPIPGILTPSEKPTQQVQPRIEEPWAQRPPPPINAPAPIFAGQDVD
LRLERQIDPCVTRKNQDLRGSLDKEFKLKIESVKTGQDVDLRLDRQIDPRVARLDQDLRG
SPQTQPAPVSAPVIPVTTDLRGANAFNMADNLLSVEGIESFYRDPRSERFGRDSRDLRDS
RPIDPRITKPPPAPVAPPIVPRPVVAPTVPAPSTVTSNTTGSSATTISQPASSATSRLVA
GMSPAGSIPSGASDQEKAALIMQVLQLSDEQIAMLPPEQRQSILVLKEQIAKSTQR
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgagtaattcaactatttcggatcaaacactgatggacaagtcgatgcggagcgtcttt
gtcgggaatattccgtacgaggctacggaggagaatctgaaggatatcttcagtgaggtg
ggaccggtgctttcgtttaaattagtatttgatcgtgagacaggcaagcccaaaggatat
ggcttttgtgagtataaagatcaggagactgctctaagtgctatgagaaacttaaatgga
tatgaaattggtggacgaacgttacgcgtggacaatgcttgcacggagaaaagtcgtatg
gagatgcaaagtctcttgcagggtcagagtacagagaatccttatggagaagccgttcag
tcagataaggcaccagaagcgataagcaaagctgtggcatctttgccaccagagcagatg
tttgaactgatgaaacagatgaaactttgcgttcaaaataatccaaatgaggcacgtcaa
atgcttctgcagaatcctcagttggcgtatgctctgctccaagcacaggtggtcatgaga
atagtggaccctcatacagctgtcagtatgttgcacaaggctaatcctatcccaggtata
ctgacaccatcggagaaaccaactcagcaggtacaaccgcgaatcgaggagccttgggca
cagcgacccccaccacctattaatgccccagcgcctattttcgcaggtcaggacgtagat
cttcgactagagagacagatagatccgtgtgtaactaggaagaatcaagatttgagagga
tcactggacaaggaatttaaattaaaaattgaatccgtaaaaacaggtcaggacgtagat
cttcgactagacaggcagatagatccgcgtgtagctagattggatcaagatttgagagga
tcaccccaaacgcagcctgcgccagtcagtgcgccggtgataccggtcaccactgatctg
aggggggcaaatgcatttaatatggcagacaacctactttctgtggaaggaattgagagc
ttttatcgcgatccgagatctgagagattcggcagagattcaagagatcttagagattcc
aggcccatcgatcctaggatcactaaacctcctccggctcctgtcgcgcctccgattgtt
ccgagaccggttgttgcaccaactgtgccagcaccaagtactgtaactagcaacacaact
ggttcgtctgccactacgatttcgcagcctgcgagttctgcaacttcgaggctagtggcc
ggaatgtctccagcgggaagtatccccagtggtgcgtctgatcaggaaaaggcggccttg
ataatgcaagtattgcaattgtcagatgagcaaattgcaatgcttcctcctgaacagagg
caaagtatcctagtgctaaaggaacagattgcaaaaagtacacaacgttaa
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integrated database retrieval system
