Trachymyrmex septentrionalis: 108754801
Help
Entry
108754801 CDS
T11226
Name
(RefSeq) putative RNA exonuclease NEF-sp
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108754801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsep03009
]
108754801
Ribosome biogenesis [BR:
tsep03009
]
Eukaryotic type
Pre-60S particles
RNases
108754801
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
MetOD2
GAD
Motif
Other DBs
NCBI-GeneID:
108754801
NCBI-ProteinID:
XP_018352904
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MKERTTKQLQRLEKKKAKMAAFLEIARLNDKDKEIKLQAVKQTVATIDVFNNSNDKNNTA
GDNSRKRTCEKSSENICLEACKEENTDGSELQDNTKKPRLSDNQYASLKEELRKRKKRLQ
AIPRLTLKAVGENATLDVGNLGKRIPIFLSDIQHLLLYSLLGHHSPYLPARWCKLEKYNK
ISHTVVIVLEGLSSYHFMAYESMFPHIVHNLKHRLEVITPAVYGASITEELAAVPLTGTQ
SDKLIKRYGSLETALQTNGNVIKLLRSVFPMHSIKNDVKFSTKNLNENLPPTDKFCRTKL
LLSLWQMVEENYPVPLKGTLAERYGSYILTKDVYEEATSTSPMFGLDCEMCLTTSNILEL
TRISIVDEDMNVIYDSLVKPENVITDYLTRYSGITENMLDDVTITLHDVQQKIRTLLPPN
AILVGQSLNSDLHTLKMMHPYIIDTSVIFNLTGDRYRKTKLQILAREFLGESIQDDKAGH
CSTEDSKASMKLVKLKLANSVNYGDAVLLGDRSMRILKMESNNEISKQELQKTEIKKYAT
SIFSHITKNKGTTAAIVGNDEVISEYSKYLTNSSLNVMDDESFAKDDQVRLVIADNDKHA
VDRTSEIAMEHAFVLCHVKLKEEQLKDEQLEETFRTVNKWIYKVWQYSAINSLACVIFSG
QNNIANGSCFLNIKTEISSDIIIRA
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaacgtacaacaaaacaattacagcgattagaaaagaagaaagcaaagatggca
gcatttttggaaattgcaagactcaatgacaaagataaagaaataaaattacaagctgta
aaacagacagtagccaccattgatgtatttaacaattcaaacgataaaaataatacagca
ggagataattctcgtaaacgaacttgtgaaaaaagttctgaaaatatatgtttagaagct
tgtaaggaagaaaatactgatgggtcagaattacaggataacactaaaaaacctagatta
agtgataaccaatatgcgagcttgaaggaagaacttagaaaacgcaagaagagacttcaa
gcaattccaagactcactctcaaagcagttggcgagaacgctactctcgatgtcggaaac
ttgggaaagaggataccaatatttcttagcgatatacaacatctgttgttatattcacta
cttggacatcattctccttacttaccagcgagatggtgcaaacttgagaagtataacaaa
ataagccatactgtagtcatcgtgcttgaagggttgtcttcatatcattttatggcttat
gagagcatgtttccacatatagtacataacttaaagcatcgtttagaggtgataacgcca
gctgtctatggtgcatccataacagaagagcttgcagctgttcctttaacaggaacacaa
agtgataaactaattaaacgatatggctccttagaaactgctttgcaaacaaatggaaat
gtcataaaactgctaagaagtgtttttccaatgcattcaataaaaaacgatgtaaagttt
tctacaaaaaacttgaatgaaaatttaccaccaactgataaattctgtagaacaaagtta
cttttatcgttatggcaaatggtggaagaaaattatcctgtaccactaaaaggaacatta
gcagaaagatacggttcgtatatattaacaaaagatgtttatgaagaggctacatcaaca
tcaccaatgtttggcttagactgtgaaatgtgcttaacaacaagcaacattcttgaactt
actagaataagtatcgtagatgaggatatgaatgtaatttacgacagcttagtgaaacct
gagaatgtaataacggactatctgactcggtacagtggtattactgagaatatgttagat
gatgtcacgattacattgcacgacgttcagcaaaaaataagaacgttacttcctccaaac
gcgattctcgtaggacaaagtttgaattctgatttacatacattaaaaatgatgcacccc
tatatcattgatacttctgtaatatttaatctcaccggggataggtataggaaaacgaaa
ttgcaaatcttggcgcgcgagtttctcggagagagtattcaagacgataaagctggacat
tgctcaacagaagactcgaaggcttctatgaaattagtgaagttaaaattagcgaacagt
gtgaattacggggacgctgtgttgcttggtgatcgcagcatgagaattttgaaaatggag
agtaataacgagatatcaaagcaagaattgcaaaaaacagaaataaagaaatatgccacg
tcaatattcagtcatataacgaaaaataaaggcaccactgccgctatcgtaggcaatgat
gaagtgatatccgaatattctaagtatttaacgaactcttctctcaatgtcatggacgat
gaaagtttcgcaaaggatgatcaagtacgtcttgtgatagcagataacgataaacatgcc
gtagaccgaacttcagaaatagcgatggagcatgcttttgtattgtgccacgtgaagctt
aaagaagaacaattgaaagatgaacagctagaggaaacgtttcgcactgtaaataaatgg
atttacaaagtttggcaatatagcgcaataaacagtcttgcatgtgtgatattcagtggg
caaaataatattgcgaacggttcttgttttttaaatattaaaacggagatatcgtcggac
atcatcataagagcttga
DBGET
integrated database retrieval system
