Trachymyrmex septentrionalis: 108754839
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Entry
108754839 CDS
T11226
Name
(RefSeq) syntaxin-5
KO
K08490
syntaxin 5
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108754839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsep04131
]
108754839
Membrane trafficking [BR:
tsep04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
108754839
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
DUF16
Syntaxin-5_N
TRPM_tetra
DUF2207_C
AAA_lid_TANC1
Nup54_C
Motif
Other DBs
NCBI-GeneID:
108754839
NCBI-ProteinID:
XP_018352965
UniProt:
A0A195EV17
LinkDB
All DBs
Position
Unknown
AA seq
372 aa
AA seq
DB search
MSARRRHVVGPVVNRDLASSSGSRHYYDGDEASSRLLSEETVNLDPSEQQPTTTTTTTTT
TTMTSRDRTNEFANAIRSMQSRTVTRTAANLQNPRRARQIQSYSNFMMIAKNISKNIAGT
YIKLEKLALLAKKKSIFNDRQMEIEELTNIIKTDLKSLNLQIGKLQELGKSQRESFGSSQ
SHHIASHSSSIVMTLQSKLANMSNHFKNVLEVRSENMREEQSRRQQFTQGSLSTMLPPSV
VSGKQGSLLLQEEISSNSVAIDLEPVMNQQLQQIIQDDTDAYVQSRAETMQNIESTIVEL
GGIFQQLAHMVKEQEEMVERIDSNIEDTELNVEAAHTEILKYFQSVTSNRWLMIKIFAVL
IFFFIFFVVFLA
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcacgcagacgtcatgttgtagggcccgtggtgaatcgcgaccttgcgagctcg
agcggctcgcggcactattacgatggagacgaagcgagcagcagattgttgagcgaggag
actgtcaacttggacccaagtgagcaacagccgacgacaacgacgacgacgacgacgacg
acgacgatgacatcccgcgacaggaccaatgagttcgccaacgcgattcgctctatgcag
agcaggaccgtgacgcggaccgcagcgaatctgcaaaatccgcgtcgcgcacgccagata
cagagctactcgaactttatgatgatagctaagaacattagcaagaacattgctggcaca
tatatcaagctggagaaacttgccttgttggctaagaaaaaatccatatttaacgacaga
caaatggaaatcgaagagcttacaaatattataaaaactgatctaaaaagcttaaatctt
caaatcggaaaactacaagagcttggaaagtcgcagagagaaagctttggttcttctcag
agtcatcacattgcttctcattcttcctcaattgtgatgacattgcaatcaaagttagct
aatatgtctaatcatttcaaaaatgtcttggaagttcgttctgagaatatgagagaggaa
caaagcaggagacagcagttcactcaaggatctttgtccactatgctccctccgagtgtt
gtttctgggaaacaaggttccttgttactacaagaagaaatttctagtaattcagttgcg
atagatcttgaacctgtgatgaatcagcagttacaacaaattatacaagatgatactgat
gcgtacgtgcaatcgagagccgaaactatgcaaaatatagaatctactatagttgagtta
gggggtattttccaacaattagcacatatggttaaagaacaagaagaaatggttgaaagg
atagatagtaatatagaagataccgagctaaatgtggaagctgcacacaccgaaatactg
aaatactttcagtctgtgacaagtaataggtggctaatgataaagatatttgcagtcttg
atatttttctttatattttttgtagtattcttagcataa
DBGET
integrated database retrieval system