Trachymyrmex septentrionalis: 108755115 Help Entry 108755115         CDS       T11226                                  Name (RefSeq) probable helicase senataxin   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism tsep  Trachymyrmex septentrionalis Brite KEGG Orthology (KO) [BR:tsep00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:tsep03021]     108755115 Enzymes [BR:tsep01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      108755115     5.6.2.5  RNA 5'-3' helicase      108755115 Transcription machinery [BR:tsep03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      108755115 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_11 AAA_12 FHA AAA_19 Viral_helicase1 AAA_30 Yop-YscD_cpl UvrD_C_2 AAA_16 AAA_22 Motif Other DBs NCBI-GeneID:  108755115 NCBI-ProteinID:  XP_018353437 LinkDB All DBs Position Unknown AA seq 1958 aa AA seqDB search MDFALERLNEKHNTRIILKERNRSYTCGRGKDNDILCLSLLVSRRHCIFFRDTESLYVTD LRSSNGIFINGDEKKCQHTVKLYENDIIGIGCPEIDSSKETLYVYKVCIIKSPELDEEEE ETTALSRTILNNDTSQEIISHVNHDFRKRHGSNLSCDMIIPNKKPSVTYNTNKHDSSSSK RIDSNLSRNNQTLNSNTSDNLKIRHDTDINAEDDIEVIHASLVEDVRKKNTTTHNLTSAK CLSDNKSDFDDKIDVSSVENNSEDDVNDRENSNIVHKVDQIIRCESELQITDDEGANIVE HDITCKSAIKLKKTKHEPKTRFSEIDVVNLSDNEEGVFPYSQLFDIKYDDNTENKREIKQ ECINDDESNTEKIGLLNIDDEVIILTDSEDEDNPWLERLSRSQLLNEDIKPVLCDSIVKD EIDLGIWDDEILNIELSEVIKQSEIPCTSEVPCKEMSCEPRTSVDVGIKNKEDDYNTNLL TPRVDAMDIDEAGISNHSGTRDINKQINDININVKKKQKTHAKQNLELNKQIIEGVKEKL IAPTTEVCTIDVDETGISNKHNTRDIDANKRIIDVNINIKKKQKTRAKQDVKLNKQTIEG VKEKLIAPTTEVDLMDVDEAGTSNNYSMRDIDGNKRIIDANINVKKKQKTHAKQKLIASL TEIDMMDVDETGASNDSNTRCIDVNKQINDIKINIKNKTDAKRSVELIKQTIESAKQNLI APIIKVDVMNTDKTSTSNDRNTRDINRSKHITDVKIDDKKRTDTKQSIELVKQTESVKQK LITPTTEVNEMDVDESSSSDDFDLFPIDSIDRSKQITDINIDKNKQKTNVKQDTQLDKHT LESIKQKLIVKSPKRLIPIEPLSLPTRRRQSDHSKDKATKVHETSQSRVTTKEKSVLKLK AKLKDNLSKEQKENTDRKDKSKSITDNSLSSEAKSGLSISKDEKKKIIEQRKMKLKEIAA EEKKLTAENDQNTKRRNKPRAKVSFKTRGDFLITEQEPRVSKSLPDKPAELSTSSDQSKK PSRDTTNVLKESTISDKKAEICQETDVSKDTVNNVAASLQQSLYLNNINTASEKSTLDFK ATDDNKKKHSSSKDITKKSNINTDPTFQMSELRDRSTERSSVIQKENFSPNSLKSKLLKS SIKPKKIKRVTFSDRPEIREYDIDQGNSLRKLVGKDAPIPTNKLKKSVTCTDWRPKLEEF LLRIFKWNPVWLEEQRYLRCDPPIISENELQAMKLSYDSYEQYYAVAMPLLLLEIWCIMT KDFEMIQKNMQRTTVMCSIVENSITRTPIPSTDLFLTKLTLEVLVNREDFNKQNHPIYGD LVYLEYVKNQHGKQIFHKIFAYVINMQQHMVIPGSTYYNSDLQNYVKDPYTIIKYSVWTQ PLEHIIVNRVQRLRTVTYLRSNIRMVQALQYLPHSSLSKLIVNPKIEDYQLPPLNEHFTS SSLVTKEDLNSKQLEAVFRVTNAVIKKEAKLCFIQGPPGTGKSKVIVNLVTQILYGGCQD KKSLRILICAPSNAAIDEIVIRLLHIRSILKQKRFNMVRIGRSESMHPKTKDISVPQIAK RYLINVSKGIKTTDNNIEDLSILQAYINSFNAKLGSIQDVQEEKRYSLNRKLFETTVKYE LMKSNKSIDEVNSKERARYQRMSEDIILQGANIIACTLSSCYTNQMESLFGGHKERISVC IVDEATQSCEAETLIPLMLGVTTLVLVGDPNQLPATILSQRAKKLGLDQSVFSRIQNVFA SQSNNPIIMLDMQYRMEYAISYWPNRYFYGGKLKNATDYRMKFPFHAYRVLDHNFTQNYD KFSNTTEAEFVANIIYTMLKCAKWESTSATITLGVLTPYNNQRTLILNKINEKISSVSDD IKKKISFEVNTVDGFQGQERDVIIMSCVRSSGIGFLSDKQRLCVALTRAKRSLILCGNFR TFMKDKMWNTLLTDARNRRILCRMDTNATSMIKKCIIK NT seq 5877 nt NT seq  +upstreamnt  +downstreamnt atggattttgcgttggaacgtttgaacgagaaacataatacacgtataattctcaaggag cgtaatcgttcttacacctgtggtagaggcaaggacaatgatattctttgtcttagttta cttgtatctcgtagacattgtattttttttcgagacactgaaagtttgtatgtcacagac ttacgaagttcaaatggcatttttattaatggcgatgaaaaaaagtgtcagcatacagtc aaactatatgagaacgatatcattggaattggttgccctgaaattgattcaagtaaagag acattgtatgtttataaagtttgcatcattaagtcacctgaacttgatgaagaagaagaa gaaactactgctttatcaaggacaattttaaataacgatacatcacaagaaatcatatct catgtaaatcatgattttagaaaaaggcatggatctaatttaagttgcgatatgataata cctaataaaaaaccaagtgttacatataatactaataaacatgattctagttcttcaaaa agaattgattctaatttatctcgcaataatcagactcttaacagcaatactagtgataat ttaaaaatcagacatgatactgatataaatgcagaagatgatattgaagtaattcatgca tcattagtagaagatgtaaggaagaagaacactacgacacataatctgacatctgcaaaa tgtttaagtgacaataaatcggattttgatgacaaaatagatgtttctagtgttgagaat aacagtgaagacgatgttaatgatagagaaaattcaaatattgtacataaagttgatcaa attattagatgtgaaagtgaactacaaataacagacgatgaaggagcaaacatagttgaa cacgatataacttgcaaatcagcgattaaattgaaaaaaacaaaacatgagccaaaaacg cgattttccgagatcgatgttgtcaatttaagtgacaatgaggagggagtatttccatat tcccagttatttgatatcaaatatgacgataatacagagaataagagagagataaaacag gaatgcatcaacgatgatgaatcaaacaccgagaaaattggtctgctaaatatcgacgac gaggtcattattttaacagacagcgaagatgaagataatccatggttggaacgattatcc agaagtcaattactcaatgaagatataaaacctgttttgtgtgattcgatcgtaaaagat gaaatcgatttgggtatttgggatgatgaaattttgaatatcgaattgtctgaggtaatc aaacaatccgagataccatgtacttccgaggttccttgtaaagaaatgtcttgtgaacca cgtacaagcgttgatgttggaattaaaaacaaagaagatgattataatactaatttattg actccaagagtggatgcgatggatatagacgaagcaggcatttctaatcattctggtacg agagatattaataaacaaattaatgatatcaatattaatgtcaaaaagaaacagaaaaca catgcgaaacaaaatctagaattaaataaacaaataatagaaggtgtgaaagaaaaatta attgcaccgacaacagaagtttgtacgatagatgtagacgagacaggcatttctaacaaa cacaatacgagagatattgatgcaaacaaacggattattgatgtaaatattaacatcaaa aagaaacagaaaactcgtgcaaaacaagatgtaaaactaaataaacaaacaatagaaggt gtaaaagaaaaattaattgcaccgacaacagaagtagatttgatggatgtagatgaggca ggcacttctaacaattatagtatgagagatattgatggaaacaaacggattattgatgca aatattaatgtcaaaaagaaacagaaaacgcatgcgaaacaaaaattaattgcatcactc acagaaatagatatgatggatgtagacgagacaggtgcttctaatgattctaatacgaga tgtattgatgtaaacaaacagattaatgatattaagattaatataaaaaataaaacagat gcgaaacgaagtgtagagttaataaaacaaacaatagagagtgcaaaacaaaacttaatt gcaccaatcataaaagtagatgtgatgaatacagataagacgagtacttctaacgatcgt aatactagagatattaatagaagcaaacatattactgatgtcaaaattgatgacaaaaag agaacagatacgaaacaaagtatagaattagttaaacaaacagaaagtgtaaaacaaaaa ttaattacaccgaccacagaagtaaatgagatggacgtagatgaatcaagctcttctgac gattttgatctttttcctatcgatagtattgatagaagcaaacagattactgatatcaat attgacaaaaacaaacagaaaacaaatgtgaaacaagatacacagttagataagcataca ttagaaagtataaaacaaaaattaattgtaaagtccccaaaaagactgattccaatagaa ccattaagtttacctacaagaagaagacaatctgatcatagtaaagacaaagcaacaaaa gtacatgaaacttcacaatcaagagtaacaacaaaagaaaagagcgtgttgaaattaaaa gcaaaacttaaagataatcttagtaaagaacaaaaagagaatacggaccgcaaagataaa tctaaatcgataactgacaattccttgtcaagtgaagcaaaatctgggctatcaatttct aaggacgaaaaaaagaaaataatcgaacagagaaagatgaaattgaaggagattgcagcg gaagagaagaagctgacggccgaaaacgatcaaaatactaaacgtaggaataaaccgaga gctaaagtatcttttaaaactcgtggcgattttctcattactgaacaagaaccacgagta tctaaatcgcttccagataaacccgcagaattatcaacatcaagtgatcaatctaagaag ccatcaagagatacaactaatgtattaaaagaatccacaatttccgacaagaaggcagag atttgtcaagaaacggacgtttctaaggatacagtaaataacgttgccgcatcattgcaa cagtccttatatttaaataatataaacactgcgtctgagaaaagtacactagatttcaaa gcgaccgatgataataaaaagaaacacagcagtagcaaggatattacaaaaaagagcaat attaatactgatcctacttttcaaatgtcagaattgcgggatagatcgaccgaacgtagt tctgtgatacaaaaagaaaatttttcaccaaacagtttgaaatcgaagcttttaaagtcg agcataaaaccgaagaaaattaaaagagtgactttttctgacagacccgaaatacgggaa tatgatattgatcaaggcaattctttaaggaaattggtagggaaagatgcacctattcct acgaataaattaaaaaaatctgtaacctgtacagattggcgcccgaaattggaagagttc ttacttcgcatttttaagtggaatcctgtgtggctcgaagaacagcgctatctaagatgc gatccaccaataatatcggagaatgaacttcaggctatgaaactatcctacgattcttat gaacagtactatgcagttgcgatgcctcttctattactcgaaatatggtgcatcatgacc aaagatttcgaaatgattcagaagaatatgcaacgtactaccgtaatgtgttccatagtt gagaattctattacgcgcacccctataccatcgactgatttattcttgacaaaattgact cttgaagtactagtcaatagagaagattttaataaacaaaatcatcctatttacggagat ctggtatatcttgagtatgtcaagaatcaacatggtaaacaaatctttcacaagatattc gcatatgtcatcaacatgcaacaacacatggttatcccaggctccacatattataatagc gatttacagaattatgtaaaagatccatatacaattataaaatacagcgtgtggacacaa cctcttgaacacattatcgtaaatagagtgcaaagactccgaacagtcacgtatttgcga tcgaatatcagaatggtgcaggcattacaatatctccctcattcatccttgtcaaagttg attgtgaatccaaaaattgaagactatcaattaccaccactaaatgaacactttacatct tcttcactagtaacaaaagaagatttaaattcaaagcaattagaggctgtatttcgggtg acgaatgctgtaataaagaaagaagccaaattatgctttattcaagggccaccgggaacg ggcaagtctaaagttattgtaaatctagtgactcaaatattatatggtggatgtcaagat aagaaatctttgagaatcctgatttgtgcaccgtctaacgccgctattgatgaaattgtg ataagacttctacatatcagatctatcctaaaacaaaaacgttttaatatggtacgcatt ggtcgatcagagtctatgcatccaaagactaaagacatttctgtaccacagatagcgaaa cgctacctaataaatgtaagtaaaggtataaaaacaacagataacaacattgaagattta tcaattttacaagcgtatattaattcgtttaacgccaaacttggaagtatccaagacgta caagaagaaaagaggtattcacttaatagaaaactatttgaaacaacggtgaaatatgaa cttatgaaatctaataaatcgatagacgaggtcaattcaaaggagcgcgccaggtaccag cgtatgtcagaagacataattcttcagggtgccaatataattgcctgtacactttcttct tgttacactaatcaaatggaatcgctctttggcggtcacaaggaaaggatatctgtatgc attgttgatgaggcgacgcagagctgcgaagcagagactttgataccgttaatgttgggg gtgactacattggttctagtaggtgatccaaatcaactaccagcaaccattctaagccaa cgagcgaagaaattgggattagaccaatcagtattttctaggatacaaaacgttttcgcg tctcaatcgaacaatccaattataatgttggacatgcagtatcgtatggagtacgcgatc tcatattggcctaatagatacttctatggtggtaaattgaaaaacgctaccgattataga atgaaatttccatttcatgcatacagagttttggatcataacttcactcagaactatgat aaattttccaacactactgaagcagaatttgtggccaatataatttatacaatgttgaag tgcgccaaatgggaatcaacaagtgctactattactctcggagttctcacaccgtataac aatcaaagaactcttatactgaataaaataaatgaaaagatatcgtctgtatcggatgac ataaaaaagaaaattagctttgaagttaatacggtcgacggttttcaaggtcaagagcga gatgttataataatgtcctgtgtgagaagcagcggtattggatttttatcagacaaacaa agactctgtgtagcacttacaagagctaaacgtagtttaatactatgtggaaattttcgt acttttatgaaagataaaatgtggaatacattgttaactgatgcacgaaatcgtagaatt ctatgtcgtatggatactaatgcgaccagtatgattaaaaaatgcatcattaagtaa

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