Trachymyrmex septentrionalis: 108755220
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Entry
108755220 CDS
T11226
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108755220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsep03019
]
108755220
03110 Chaperones and folding catalysts [BR:
tsep03110
]
108755220
03029 Mitochondrial biogenesis [BR:
tsep03029
]
108755220
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsep04147
]
108755220
Enzymes [BR:
tsep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
108755220
Messenger RNA biogenesis [BR:
tsep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
108755220
Chaperones and folding catalysts [BR:
tsep03110
]
Heat shock proteins
HSP60 / Chaperonin
108755220
Mitochondrial biogenesis [BR:
tsep03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
108755220
Exosome [BR:
tsep04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108755220
Exosomal proteins of other body fluids (saliva and urine)
108755220
Exosomal proteins of breast cancer cells
108755220
Exosomal proteins of colorectal cancer cells
108755220
Exosomal proteins of bladder cancer cells
108755220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-GeneID:
108755220
NCBI-ProteinID:
XP_018353611
LinkDB
All DBs
Position
Unknown
AA seq
627 aa
AA seq
DB search
MNRTFFVFSFLRSFHPLVFSAKTAVAASSSITPIFRTLSFQHRSSIVHQRIFPQGSKMHK
LPTVLRGAALRQLQARTYAKDVRFGAEVRALMLQGVDILADAVAVTMGPKGRNVILEQSW
GSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATILARAIAKEGF
EKISKGANPVEIRRGVMLAVDKVKDELRILSKPVTTPEEIAQVATISANGDKAVGDLISD
AMKKVGKEGVITVKDGKTLIDELEVIEGLKFDRGYISPYFINSSKGAKVEFQDALLLFSE
KKISSVQSIIPALELANSQRKPLVIIAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDN
RKATLQDMAISTGGIVFGDDANLIKLEDVQLSDLGQVGEVIITKDDTLILKGKGKKSDID
RRADQIRDQIENTTSDYEKEKLQERLARLASGVAVLRVGGSSEVEVNEKKDRVHDALNAT
RAAVEEGIVPGGGTALLRCIPILQQIKAVNGDQETGIKIVANALRMPCLQIAQNAGVDAS
VVVAKVSEGKLGYDALNNEYVDMIEKGIIDPTKVVRTALTDAAGVASLLTTAEAVVTEIP
KEEPQPPMGGMGGMGGMGGMGGMGGMM
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgcacgttcttcgtcttctcattcctgcgctcattccatccactcgtcttttcg
gcaaagacagcggtcgcagcctcgagttcgatcacgccgattttccgcactctcagcttc
caacaccgatcatcgatcgttcatcaaagaatttttccccaaggatcgaagatgcataaa
ttacctactgtattgagaggagctgctctgcgccagttgcaggcacgtacttatgccaaa
gacgtgcgttttggggctgaagttcgtgccttgatgttgcaaggtgtagatattttagca
gacgccgttgctgtaacgatgggtcctaaaggacgtaacgttattctggagcagagctgg
ggaagcccaaaaatcacaaaagacggcgtgactgtggcaaagggcattgaactaaaagac
aaatttcaaaatattggagctaagttagtacaggatgtagctaataatactaatgaggaa
gctggagacggtaccactactgcaaccatattagctagagcaatcgccaaagaaggattt
gaaaaaatcagtaaaggtgccaatcctgtagaaatcagacgaggtgtaatgttagcagta
gacaaagtcaaagatgaattgagaattttgagcaaacctgtcacaacacccgaagaaatc
gctcaagtggcaacaatatctgctaacggcgacaaagccgttggtgacttgatctcggac
gctatgaagaaggttgggaaggaaggtgtaatcactgtgaaagatggcaaaacgctcatc
gacgaacttgaagttatagagggactgaagttcgatagaggttacatctctccttacttc
atcaactccagtaaaggagccaaagtcgagttccaagacgcgctccttctttttagcgag
aaaaagatctcttccgtccaaagcatcatacccgctttggaattggcgaattcacaacgc
aaacctcttgtcataatcgccgaggatgtcgacggggaagctttatcgaccctcgttgtt
aatcgtttgaaaattggactgcaagtggctgcggttaaagctcccggttttggtgacaat
aggaaggccactcttcaagatatggcgatatccaccggtggcattgtgttcggtgatgac
gccaatctcatcaaattagaagacgtccagttaagcgacttgggtcaagtgggagaagtc
atcattacaaaggacgatactctcatcttaaaaggcaagggaaaaaagtctgatatcgac
agaagagccgaccaaatcagggatcaaattgaaaacaccacatccgattatgaaaaagag
aagctgcaggaacgtttggcgaggttagcgtcaggcgtcgccgtcttaagagttggcgga
agcagtgaggtggaagttaacgaaaagaaagaccgtgtacatgatgcgctcaacgccact
cgcgccgctgtcgaggagggaatcgttcctggaggtggcaccgcattgttgagatgcata
ccaatattacaacagattaaggctgtgaacggcgatcaagaaactggaataaagattgtg
gcgaatgctttgcgtatgccatgcttgcagatcgcgcagaacgccggcgttgacgccagc
gtggtagtggccaaagtaagtgagggcaagctcggctacgatgcccttaacaacgagtac
gtcgacatgatcgaaaagggcatcatcgatcccacgaaagtcgtacgaacagcacttacg
gacgctgccggtgtggcatcgttgttgacaacggcagaagcggtcgtcaccgaaatacct
aaggaggaaccccaaccaccgatgggcggtatgggcggtatgggtggtatgggtggtatg
ggtggtatgggcggcatgatgtaa
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