Trachymyrmex septentrionalis: 108755349
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Entry
108755349 CDS
T11226
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03018
RNA degradation
tsep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108755349
09123 Folding, sorting and degradation
03018 RNA degradation
108755349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsep03019
]
108755349
03041 Spliceosome [BR:
tsep03041
]
108755349
Messenger RNA biogenesis [BR:
tsep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108755349
mRNA degradation factors
5'-3' decay
Lsm complex
108755349
Spliceosome [BR:
tsep03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
108755349
Complex C
U2 snRNP components
108755349
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
108755349
NCBI-ProteinID:
XP_018353781
LinkDB
All DBs
Position
Unknown
AA seq
96 aa
AA seq
DB search
MLFYSFFKSLIGKDVVVELKNDLSICGTLYSVDQYLNIKLADISVTDSEKYPHMLSVKNC
FIRGSVVRYVQLPVDEVDIHLLTEAARREAMNAQAR
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgctgttttattccttcttcaaatccttgatcggaaaggacgtagtggtcgaattgaaa
aatgatctcagtatctgcggcacgttatattctgtcgatcagtatctaaacataaaattg
gctgacattagtgtaacagattcagagaagtatcctcatatgttatcggtaaaaaattgc
tttatccgtggatctgtggtacgatatgtacaacttccagtggatgaggtagatatccat
cttttaactgaagcggcacgaagggaagcaatgaatgctcaagcaagatag
DBGET
integrated database retrieval system
