Trachymyrmex septentrionalis: 108755697
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Entry
108755697 CDS
T11226
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108755697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsep03019
]
108755697
Messenger RNA biogenesis [BR:
tsep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108755697
mRNA degradation factors
5'-3' decay
Decapping complex
108755697
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
TOR1L1_C
Syntaxin
Motif
Other DBs
NCBI-GeneID:
108755697
NCBI-ProteinID:
XP_018354367
LinkDB
All DBs
Position
Unknown
AA seq
1083 aa
AA seq
DB search
MPERNTADGMSKSGEDNLRHLNFQQTVEFNGQEDQHSVGLCSTNVTIIPSPGDHNHGSSK
VKLKNIVDFTWDHHLYTGQLLAVHVSGKYLAYGLKVGTGGGVVRVVYKDLEHRSLLRGMR
GVIQDLAFAHVANAILACIDYTGSLFIHTIEPTPSELLCSLVLQVDAEDVSPTSHRVIWC
PYIPEEDASDGDEVSKLLVLTRGSKVELWSVATIASNFRSVEATDPSVKESGGMMEINQH
SGSIVEVALSPDGTALATASTDGEVKFFQVFLHSNSHNGNPQPRCLHQWRPHGGRPISCL
FFLDDHKNYQPDVQFWRFAVTGCDNNSELKVWSCEMWTCLQTIKFAPNPSTGKIPVLKAG
LDLGAGYLFLSDIYNKILYILSLTKDKNEALACISTVSEFLLPYPILSFGIVDADQRKIR
STGESLEDLCEEIEENEEQLVIYMYLVQPKSLQECHIAFKPASQASNYLIDTLAHDTLEY
SEDMPDMGTVTHNGMSGENCEGERSLSSAIETTINHNTGGLNLMTPDAFSSPAKKDNNEL
ESNPGSPDLRKVLSSSPLAQAVQALNASDPPLVKNDIEEQAPASCGSSPSREVREILSLT
KPDEETDIDGKQEIKTNADEDWSNIPMVLLKDVSVHAMQESEEFPEDDENNMQRQKTKVE
PKTSSLPTDDPGLSWRTNDIELNNKLKSILDIIQDQCQELKELRTEVTRLRQESPVSTRI
ESALARMSQQQNANLEQTLYDQMTRQHEFLNTFETTIKDKIESTLPCIVEETVKPLKHQM
RLDANQMDELFQKNITELINSSHVKDTLSLTAANAAKPALEVTFKEAFTTVLLPNMEKVC
QIMFKQIQDVFIKGTREYLQHIDTVIDKQNQRHNEQLSEMLSTLVREEIQTELNRVLTTM
QDSTIRTIRDSIRENLNQQLTEISTARSRATTPAIPVTAVADAQSRVMSLLQRGQLNAAF
QQALSASDLGLVVLVCEKTEPSRVFSCTAQGSRCILQQPVILSLVQQLSADLGHRTELKH
RWLEEAILNLDPSDPVTREHMGTVLMTLQNQLATFVASNPNHRSTSRMKMLAMATRALLS
QHP
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagaggaacacggccgacggtatgagtaagtccggggaggacaacctgaggcat
ctcaacttccagcagactgtagagtttaatggacaggaggatcaacattcagttggatta
tgtagcacaaatgtgaccattatcccttctcctggtgatcataaccatggtagttctaaa
gtgaagttgaaaaatattgttgacttcacatgggatcatcatctttacacaggccagttg
ttggctgttcatgtatctggaaaatatttagcttatggtttaaaagttggtaccggtggt
ggggtagtccgtgttgtatacaaggatttagaacatagatctctgctgcgaggaatgcgt
ggtgttattcaagatcttgcatttgctcatgttgcaaatgcaattcttgcgtgtatcgat
tatacaggatcactttttatacacacaattgaacctacaccgtctgaattattatgtagt
ttagtattacaagtagacgcagaagatgtttctccaactagtcacagagtgatttggtgc
ccatacatcccggaggaggatgcttctgatggagatgaagtatcaaaattattagtccta
acacgtggttccaaggttgaattgtggtcggttgcaacaatagcatcaaactttagatca
gtagaggcaacagatccaagtgttaaagaaagtggtggcatgatggaaattaatcagcac
tcgggaagtattgttgaagtcgcccttagtccagatggcactgcattggcaacggctagt
acagatggagaagtaaaattctttcaagtcttccttcatagtaattctcacaatggcaat
ccgcaaccacgttgtttacatcaatggaggcctcacggaggacggcccatttcctgtctg
tttttccttgatgatcataaaaattatcaacctgatgttcaattttggagatttgctgtg
acggggtgtgacaataattcagaattaaaagtatggtcgtgcgaaatgtggacttgttta
caaacaatcaaatttgctccaaatccttccacgggcaaaataccggtactaaaagcaggc
ttagatcttggtgctggatatctgtttttatcagacatatataataaaattttatatata
ttaagtcttacgaaagataaaaatgaagcgttagcttgcataagcacggtatcagagttt
ctcctaccatatccaattctaagtttcggaattgtcgatgctgatcaacgtaaaatacgg
tcgactggtgaatcattagaagatctatgtgaagagattgaggaaaacgaagaacaactt
gttatttacatgtatctagtccaaccaaagtcgttacaagaatgtcacattgcttttaaa
cctgcctcgcaagcaagcaattatcttatagatacacttgctcatgatacgctggaatat
tctgaagatatgccagatatgggaaccgttactcacaacggtatgtccggagaaaattgt
gagggagaacgatctttatcttcagcaattgaaacaacaattaatcataatactggtggc
ttaaacttaatgacgcctgatgcatttagttcacctgcaaaaaaagataacaacgaattg
gagtctaatccagggagtccagatttgaggaaagtcttgtcaagtagtcctcttgcacaa
gcggtgcaagctttgaacgcatctgatccaccactagtaaaaaatgatatagaagagcaa
gctcctgcaagttgtggaagcagtccatctagagaagtaagggaaattttatctcttacc
aaaccagatgaagaaactgatatcgacggcaagcaggaaataaaaacgaatgccgatgaa
gattggtctaatatcccgatggtcttgcttaaagatgttagtgtgcatgcgatgcaagag
tctgaagaatttcccgaagatgatgaaaataatatgcagaggcaaaagacaaaagttgaa
ccgaagacgtcgtctcttcctaccgatgatcctggattatcatggcgaacaaacgatatt
gaactaaataataaattgaaatctattttagatataattcaggatcagtgtcaagaacta
aaagagttacgtacagaggttactagattacggcaagaatcaccagtatccacgcgaata
gaatctgcattggcgagaatgtctcagcagcaaaatgcgaacttggaacaaactctatat
gatcaaatgactcgtcaacatgaatttctaaatacatttgaaacaacgatcaaagataag
attgaaagtaccttaccgtgtatagttgaagaaacagtaaagcctttgaagcatcaaatg
agattagacgcaaatcaaatggatgaactcttccagaagaatataactgaattgataaat
agttcacatgtaaaagataccttatctttgacagctgcaaatgcagcaaaaccagctttg
gaagttacttttaaagaagcatttacaactgtcctcttacctaatatggaaaaggtttgc
caaattatgtttaagcaaatccaagacgtcttcattaaaggtactcgcgaatatttacaa
catattgatacagttatcgataaacagaatcaacgtcataatgagcagttaagcgaaatg
ttatcaacattggtacgcgaagaaatacaaactgaattgaatagagttttaacgacgatg
caagatagtactatacgaacaattcgtgattctatacgagaaaatctaaatcagcaactt
acagaaatttctactgcgcgatcaagagctacaacccctgctatacctgtaaccgctgta
gctgatgctcaatcacgtgttatgtctcttcttcaaagaggtcaattaaacgccgctttt
caacaggctttgagtgcaagtgatttgggattggtagtactagtgtgtgaaaaaacagaa
ccttcaagagtattttcgtgtacagcacaaggttcacgatgcattttgcagcaacccgtg
attctttctctcgtacaacaattatctgctgatttaggacatcgtacagaattgaaacac
aggtggttggaagaagcaatattaaatttagatccaagtgatcccgtaacacgagaacat
atgggcacggtgctaatgactctacaaaatcaattggctacatttgtagcaagtaatccg
aatcatcgatcgacgagtcgcatgaaaatgctcgctatggctacacgtgcattattaagt
cagcatccttga
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integrated database retrieval system
