Trachymyrmex septentrionalis: 108755856
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Entry
108755856 CDS
T11226
Name
(RefSeq) trithorax group protein osa isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108755856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsep03000
]
108755856
03021 Transcription machinery [BR:
tsep03021
]
108755856
03036 Chromosome and associated proteins [BR:
tsep03036
]
108755856
Transcription factors [BR:
tsep03000
]
Eukaryotic type
Helix-turn-helix
ARID
108755856
Transcription machinery [BR:
tsep03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108755856
Chromosome and associated proteins [BR:
tsep03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108755856
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
108755856
NCBI-ProteinID:
XP_018354697
LinkDB
All DBs
Position
Unknown
AA seq
2104 aa
AA seq
DB search
MAATQAESQQNDVKLNESVKCAQKRTQVGGNSASASAKQQLDSEPDDKVSRGAAQLLKYV
SRGGDTTGYEMSQYREDIGGHTAAGEVKSPREAGQTSQEPVGKQEAHDAPGHPGHPGHPF
APNVIRDYSDEYSNNKSGDQFAPTKSSLVVDYPPGKQLPEYVAKHADFPGKQLDYHGKHL
MHESDRTHRAEMEEHYSPSKIETRLYVGATSSNFGQPRFLSGQGMSQTAGPTPTLNQLLQ
ASTPVHRFHGNYPGMGPEYQQPWPMQRPPVVPPVYPQPSQRPPQTGSPRLHTGPGAQSSP
TPMQYQQYTQRYSSPTRPHAPYSHHQLNSYTTQTSHPSSLYTEQRGWNQGGPPNPPPPPS
NQVTPSGQSPQRALSQSPAPPPAASPQPQATSQTQAFHNIQQRATTPNTQGIDSGELSGQ
NSNDSSNGPACPGTPNSQGMRPTPSPTGSTGSRSMSPAVGRSFLRQQNVQMPPRPSSSQS
DSSGPAPRMSHSPMTTQGAYQQPLGPSPHMHSYKMNSTGPGVVQPGPGSTALGGISPMGG
GMGYAAGGAAAGQPGGYHAQSTYPPPRPHMQFPQGYPTPANSQPPPNNQYQPPNRPNNLV
QYPPYTHKMGFNSVPPGMPPSPGPPQVYGAGGATAMVPPGAPGVPVIGNMGPPASSMGPP
PPSPNHISNQPPPPTSSAVPHLHTPAATPPLNHEGSPMPPPSTTPNSHPASAPTPTSHNS
ADLTAETSNDSGITTTASGTSAINVISTSSGTVTSVITTGPDGTSLDEGSQQSTLSNASA
ASGEDPAFTPKVRKEMIGGYHSHPATPQSTVPSPGAASINSIHEEYSDMNSPGWPRTPAS
PVFNSHVPQDPYRSKKTDSLAKLYEMDESLERRSWLDKLVNFMEERRSPITSCPTISKNP
LDLFRLYLYVKERGGFMEVCKVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKHLLAYEC
HFDRGGVDPQPIINQVEAGSKKKGSKGTASVPSPGSSNSQDSFPAAGSSNASMDGYGSYQ
GSYAGGTPGGPSSEYTPPPPRPPSQSSTPSAHQGIQQGTYQNTGSYQNYPQEQYIRPQGN
SMSQQGEFNQPYSPRSHYPPYVPDVDRGYPSGNMPPNNATGQDMYNRYTSGVNQQGPASY
PTGTPPNARSNSYPSGPQTHPVTVQQQTATSQPSSPSQPPTVPSYSCPQDYYRQEQSGYG
APAGTQIYTTSGSANKNMPPPPPGPTQPRRHPDFAKDQQYPQYNQQRPAYPGWPNTTNQY
NSNSGNNRVQYPSQPAQSPSQQPQPQPQPPQQGTQVVTAAPTAPAVNMASNQQWASQSSN
RPSCQPPINAIAHPPPPWDHRYTNQPSPLYPTPGNHQTQLGVNPMISQQPTSKREMTFPP
DSVEAITPLLYKRRKLTRADVAPVEAWRIMMALRSGLLAESCWALDVLNILLFDDSSVSY
FGLTHLPGLLDVLLEHFSRSLSDMFESCVNDDDRYCQAADGPEVDLGAVTRPIDSEDRTK
LLSTSNYTYLSRRGRPVKIVPRDDDLFVLDTRRPWDHQECESETEPWQVDTNATKYIVTC
FQSEVGSVPFARLLRDEKPPLLQKEVDSTDLKDEAKADSVGGVHETLDFTHKSGELGDKQ
SNKDSGERKQQQQLDKKKKTKTLSDVLSRIKKEPVEMNDLTRELFEKKNDGFKKDCDSEV
TKANNNMGEHFGSDMSKNDEDSLPTQNGLNESVATVSGNIDNTIDKAEIKTETTDEHELL
TTRDDREGPRLQIRDPAGTLKRRRISDYEDESYSRDEASLYLVTETQDNLARRCVCLSTI
LRNLTFIPGNEAEFAKNVTFLSLLGKLLLLHHEHPIRAQKTRNYDREEDADFADSCSSLQ
GEGEWWWDFLHHVRENVLVMAANISGHMDLSQHPEEISRPVLDGLLHWAVCPAAHGQDPF
PTVGPNSSLSPQRLALEALCKLCVTECNVDLVVATPPYSRLQRLCSVLTRLLCRSEEQVL
REFGVNLLHFLSAADSGVARTIALQTPCVALLVAFIEQAESSAIGVANQHGLAALRDNPE
SMGTSLDMLRRAAGTLLNLARHPDNRTLLLQHESRLLALVMSQILDQQVAAIVARVLFQC
SRGT
NT seq
6315 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacgcaagccgagagccaacaaaacgatgtgaagctgaacgagtccgtgaaa
tgcgcacagaagcgtacgcaagtcggtgggaatagtgcgagtgctagtgcgaagcagcag
ctggattccgagccggacgataaagtgtcccggggcgcggcccagctgcttaaatatgtg
agtcgcggcggggacacgacgggctacgagatgagtcaataccgcgaggacattggcgga
cacactgccgccggtgaggtaaaatcgccgcgtgaggccggccagacgtcccaggagccc
gtcggcaagcaagaggcgcacgacgcgcccggccatcccggccacccgggccatccgttc
gcgccaaacgtgatacgcgactactcggacgagtatagcaacaacaaatccggcgaccaa
ttcgccccgaccaagtcctccctcgttgtcgattatccccccggcaagcagctcccggag
tacgttgccaagcacgcggactttcccggcaagcagctcgactatcatggtaaacacttg
atgcacgagtccgaccggacccaccgggccgagatggaggagcattactctccctctaag
atcgagacgcgattgtacgtcggtgctacctccagcaacttcggtcagccgaggtttctc
tctggacagggtatgtcccagaccgctggtcctacccctaccttgaaccaattgctacag
gcgtctactccggtccatcggtttcatggaaattatcccggtatgggacctgagtatcag
cagccatggcctatgcaaaggccaccggttgtgcctccagtttatccgcaacccagtcag
cgtcctccgcagacgggttcaccgagattacatacaggaccaggagcacagagttctcca
acacccatgcaatatcaacaatatacccaacgatattcttcacctacgagacctcacgca
ccttatagtcatcatcagctaaactcttatacgacgcaaaccagtcatccctcaagctta
tatacggaacaaagagggtggaatcaaggcggtccaccaaatccacctccaccgccaagt
aatcaggtcactccatcgggtcagtcaccacagcgtgctttgtctcagtctccagctcca
ccacctgctgcgtcaccgcaaccacaagctaccagtcagacccaggctttccacaatata
caacagcgagctacaacaccaaatactcaaggaattgactctggggaattatcaggacag
aatagtaacgacagttcgaatggaccagcttgcccagggacaccgaattctcaggggatg
agacctaccccgtcaccaacaggatccacaggttctcgctcgatgtcccctgctgttggt
cggtcttttttacgccaacaaaacgttcagatgcctccacgtccgtcgagtagccagtcg
gatagtagtgggccagcaccgcgaatgagtcactctcctatgaccactcaaggagcatac
cagcaaccattgggtccttcaccacatatgcatagctacaaaatgaacagtactggtcct
ggtgtagtacaaccgggacctggttcgacggctctcggtgggattagtccaatgggtggt
ggaatgggttatgcagctggtggggcagctgcaggtcaacctggaggttatcatgcacaa
tctacgtatccacctcctcgtcctcacatgcagtttccacaaggatacccaacacctgcg
aactcgcaaccgccacccaacaatcagtatcagcctcccaacagacccaataacttagta
caatatccaccgtacacgcataaaatgggctttaatagtgtaccgccgggaatgccaccg
agtccgggaccgccgcaagtttatggtgctggtggtgcaaccgcaatggtaccgccaggc
gctccaggagtacctgtcattggtaatatgggaccgccggcgagctcgatgggtccacca
ccaccgtctcctaatcacataagtaatcaaccaccaccgcctaccagttcggcagtgcca
catttacatacgccggcagctacgccgcctctcaaccacgagggtagcccgatgccaccg
ccgagtacaacaccgaattcacatcccgcgtcagcaccaacccctaccagccacaattcc
gcagatctcacggctgagacttccaacgacagcggtataaccacgactgcttcaggtacg
tcagctataaatgtcatatctacttcaagtggtactgtgacatctgtaataacaacaggt
ccagacggcacgtctctggatgaaggttcgcagcagtcaacgttatctaatgcatcagct
gcctctggtgaagatccagcatttacaccaaaagtgcgaaaggaaatgataggaggatat
cacagtcatcctgcgacaccacagagcactgttccgtctcctggcgctgctagcattaat
tcgattcacgaagaatattctgatatgaatagtcctggttggccgcgtactcctgctagt
cctgtgtttaacagtcatgtgcctcaagacccgtacagatctaagaagacagatagtctg
gcaaaattatacgaaatggacgaatcgctagaacgaaggagctggctggataagctagtc
aacttcatggaagaacgaagatcaccgatcaccagctgtcctaccatctccaagaacccc
ctcgatctatttcggctttacctctacgtgaaggagagggggggcttcatggaggtatgc
aaggtgacgaaaaataagacgtggaaggatatagctggtctattgggcatcggtgccagc
agtagcgctgcttacactttgcgcaagcattatacgaaacatctgctagcatatgagtgt
cactttgatcgtggcggtgtggatccgcaacccattatcaatcaggtcgaagcgggttcg
aagaagaagggatccaagggaactgcttccgtaccatcgccgggttcttccaattctcaa
gactcctttcccgctgctggatcaagtaacgcttctatggacggttatggaagctaccag
ggtagttatgcaggcggcacacctggtggcccatcgtcagagtatacaccgccaccaccc
aggccacccagccaaagcagcacaccctccgcccatcaaggaatacaacaaggcacttac
caaaacacaggctcttatcagaactatcctcaagaacaatatatacggccgcagggaaac
tcgatgtctcaacaaggagagttcaatcaaccgtactctcccagatcgcattatcctcca
tacgtaccggatgtcgacaggggatatccgagtggtaacatgccgccaaacaacgctact
ggacaggatatgtacaacagatacaccagcggtgtcaatcaacaaggtcccgctagttat
cctacgggaacgcctcctaacgcgcggagcaacagctatccttcgggaccgcagactcat
ccggtcactgtgcaacagcaaacggcgactagccagccttcctcgccttcgcaaccgcca
actgtgccgtcatactcgtgtccgcaagactactatcgacaggaacaaagtggatatgga
gcgcccgctggaactcaaatatataccacaagcggatcggctaacaagaacatgccacca
ccccctccaggtcccactcaacctagacgccacccagactttgccaaagaccaacagtat
ccccaatataatcaacaacgaccagcgtatccaggatggccaaatacaactaatcagtac
aatagtaatagtggaaacaatagggttcaatacccgagccagccggcacaatcgccatca
caacaaccacaaccacaaccgcaaccgccgcaacaaggaacccaagtcgtcaccgctgcc
ccaactgctccggcagtcaacatggctagtaatcaacaatgggccagtcagtcatcgaat
aggccttcatgccaaccgcctataaacgctatagcgcacccgcctccaccgtgggatcat
cgctacacgaatcaaccgtcccctttgtatccaacacccggaaatcatcagactcaactc
ggagtaaatcccatgatcagccaacaaccgacgtcaaagagagaaatgacattccctcct
gacagtgtagaagcgatcacgcctcttttgtacaagcgacgaaaattgacgcgcgctgac
gtggcgccagtagaagcttggcgcattatgatggctttgagatcgggtctgctcgctgaa
agctgctgggcccttgacgtattaaacattttgttattcgatgactcttcagtaagttat
ttcggattgacacacctccccggactactggacgttctgctggaacacttctcgcgttct
ctctccgacatgttcgaatcatgtgtaaacgacgacgatcgctattgccaggccgcagat
ggtccggaggtagacctcggtgcggtaacgcgcccgatcgattcggaagatcggacgaaa
ttgctgtcgacatcgaattatacgtatctctcgaggagaggtcgccccgttaagatcgtc
cctcgggatgacgatttgtttgttttggacacccggaggccttgggatcatcaggagtgc
gagtcggaaaccgagccgtggcaagtcgacacgaacgcgaccaaatacatcgtcacgtgt
tttcagtctgaggtgggctcggtgcctttcgcccgtttattaagggacgagaaaccgccg
ttattgcagaaggaagttgacagcacagatttgaaagacgaagccaaagcggatagcgtc
ggtggtgtccacgagacgttagacttcactcataaatccggtgagcttggcgacaagcaa
tctaataaagacagtggcgaacgcaagcagcagcaacagctggacaagaaaaagaagacg
aaaactttgagtgacgtgctgtcgaggatcaaaaaggagccggtagagatgaacgatctc
acaagggagttgttcgagaagaaaaatgacggttttaaaaaggattgtgacagcgaagtg
acgaaagcaaacaacaatatgggtgagcactttggcagtgatatgtcaaagaacgacgag
gactcgttgccgacgcaaaatggactgaatgaatcggtagcgacggtttcaggcaacatt
gataataccatagataaagctgagatcaagacagaaacgacggatgaacatgaattgcta
acgacgagagacgacagggagggaccaagattacaaataagagatccggcaggaacgtta
aaacgacggaggataagtgactacgaggacgagagctactccagggacgaagcgagtctt
tacctggtgacagaaacgcaggacaacctggctcgtcgttgcgtgtgcctgtctacaatc
ttgaggaatctcacttttatccccggcaatgaagcggaattcgcaaagaacgttacgttc
ctcagtctacttggcaagttattgctattgcatcacgaacatccgatacgggcgcaaaaa
acgcgcaattacgatcgtgaagaggacgcagattttgcggactcgtgtagcagtctacaa
ggcgagggtgaatggtggtgggactttctccatcatgtgagggagaacgtcctcgtgatg
gccgccaacatatccggccatatggatctgagccagcatccggaggaaatctcgcggcct
gtgcttgacggtcttcttcactgggccgtatgcccggctgcgcatggtcaggatcctttc
ccaacggttggtccaaattcctcgttgtcgccgcagagactcgcgcttgaggctttgtgc
aaattatgcgttaccgagtgcaatgttgatctggtagtggcgacgccgccgtactcacga
ttacagagactatgctcggtgctgactaggctcctctgccgcagcgaagaacaggtgctg
cgtgagttcggcgtgaatctactgcacttcctgtcagccgcagacagcggcgtcgcgcgc
accatcgccctgcagacgccgtgcgttgcgctgctcgttgcattcatcgagcaggccgaa
tcaagtgcaatcggtgtcgctaatcagcatggtctcgcggctctgcgcgacaatcccgaa
tcgatgggaactagcctggatatgttgcgacgtgcggccggcacgctgctcaacctcgcc
aggcatccggataaccgaactctccttctgcaacacgagtcccgcctgctcgccttggtg
atgagccagatcctggatcaacaggtcgctgcgatagtcgcgcgtgtgttgttccagtgt
tcgaggggcacgtaa
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integrated database retrieval system
