Trachymyrmex septentrionalis: 108756489
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Entry
108756489 CDS
T11226
Name
(RefSeq) protein strawberry notch
KO
K26273
protein strawberry notch
Organism
tsep Trachymyrmex septentrionalis
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsep03036
]
108756489
Chromosome and associated proteins [BR:
tsep03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108756489
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
108756489
NCBI-ProteinID:
XP_018355854
LinkDB
All DBs
Position
Unknown
AA seq
1367 aa
AA seq
DB search
MASKKYDDGVSDDTSGSDFDDEEDPDKIEVPGGGKDLATAAVIGSIKEEKPPIADLPTNS
LDKMQGPLNELNQKFGNKIPGGLVTKNATPGYEMVHVGGSQGTVPGNFVGGTGQMNQLNQ
LATGGYPGLPQGLNLAGFNPAAFLQSSMDMNALMSSFIGMPGMNMGVNPFVQLLNQSGIT
NWAGLSGKTVSQMWMNSGDPTKLMQPNIPEEEEVDDEDMGVAETYADYMPTKLKLGRKHP
DPVVETASLSSVEPTDVWYKISIPEDTIRSGALSALQLESITYASQQHEHLLPDGTRAGF
LIGDGAGVGKGRTIAGIIFENYLKGRKRAIWVSVSNDLKYDAERDLNDIGASKIEVHALN
KFKYAKISSAVNGNVKKGVIFSTYSALIGESTQSGGKYKSRLKQLLQWCGEDFDGLIIFD
ECHRAKNLCPTGSSKPTKTGLTVLELQNKLPKARVVYASATGASEPRNMAYMVRLGMWGE
GTPFPEFTGFITAVEKRGVGAMEIVAMDMKLRGMYIARQLSFHGVAFKIEEVPLSKDFTK
IYDHSVRLWVEAMQRFQEAAELIDAENRMKKTMWGQFWSAHQRFFKYLCIAAKVKHAVSV
AREAVKCGKCVVIGLQSTGEARTLEQLERDDGELSDFVSTAKGVLQTLVEKHFPAPDRSR
IQRLLGLEPPKFKLEDDDLDAGGSAGGSKRKPIRQAAQRATKKVRSWSSEEEISDEEKNG
AHSSGSEYKLSGTESEDDHHTDEESNASSDFNPFFSDSDSDVDPWDRRKKKGKKQKKPAK
KRLSTQDKIQSMLVHKQSSNKSKRNGDTAMSGSMSATGGSVPQNQAPPRDAIERACSMKE
ELLSQIEILGDRLPPNTLDQLIDELGGPENVAEMTGRKGRVVQREDGGIEYESRSEVDVP
LETLNLTEKQRFMDGEKTVAIISEAASSGISLQSDRRARNQMRRVHITLELPWSADRAIQ
QFGRTHRSNQVNAPEYIFLISDLAGERRFASIVAKRLESLGALTHGDRRATETRDLSQFN
IDNKYGRSALEATMKTIMGYEPPLVPPPQDYQGDFFKDVADALVGVGLICNSESTPGVLT
LDKDYNNMSKFLNRILGMPVDLQNRLFKYFTDTLNAIVTQAKKTGRFDMGILDLGTSGEN
VRRVRLYRFLRKHATGKAPTELHVVHVERGMSWSEVTDKFSELTGAKEGFYLSHQIRNGK
QTAILSAVVDSSKKKSESKKDQLYMVYRPNTGLQLRQETLGELEKKYKKVSADEAEPHWT
QQYEASVNTCSHAYWSGNCKNTSLGIDCEVGLRRRSYNVLAGSVLSVWSRVENVLATRSG
HNSKMQVIRLRTDEGLKIVGTLIPKSCMESLRQALSSDAEKTEEQTF
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcaaaaagtatgatgatggagtaagcgatgataccagtggtagtgactttgat
gatgaagaggatcctgataaaattgaagtacctggtgggggtaaagatcttgcaactgct
gctgtaattggaagtattaaagaagagaaacctccaattgcagacttgccaacaaattct
ttggataaaatgcaaggaccattaaatgaattaaatcaaaaatttggtaacaaaattcct
ggaggattagtgacaaaaaatgcaacaccaggttacgaaatggtgcatgtaggaggctct
caaggcaccgtaccgggaaattttgttggcgggacaggtcaaatgaatcaactgaatcaa
ttagcaactggtggatatcctggtttgccacaaggattaaatcttgcaggattcaatcct
gctgcctttcttcaatcaagcatggacatgaatgctttgatgagtagctttataggtatg
cctggtatgaacatgggagtaaatccttttgttcagttacttaatcaaagtgggattact
aactgggcaggattgtcaggaaagacagtgtcgcaaatgtggatgaattcaggtgatcca
acaaaattgatgcagccaaatattccagaagaggaagaggtagacgatgaagatatgggt
gttgctgagacttatgctgattatatgccaacgaaactcaaacttggacgaaagcatccg
gatccagttgtcgaaacagcatctttgtcgagcgtcgaaccaacggatgtgtggtacaag
atctccataccggaggacacgatacgatctggtgcgctctctgcccttcaacttgaatcc
atcacgtatgcttctcaacagcacgagcatctcttacccgatggtacacgcgccggattt
ctgatcggcgatggtgcgggtgttggcaagggcaggactatagccggtattatattcgag
aattacttgaaaggtcgaaaacgtgccatttgggtatcagtgtcaaatgatctcaaatat
gacgccgagcgtgatttgaatgacataggtgcatcgaaaatagaagtacatgctttgaat
aaattcaaatacgcgaaaatctcgtcagctgtgaacggtaatgtaaagaaaggtgtaatc
tttagtacatattctgcattaattggtgaatcgacacagagcggcgggaaatataaaagc
cgattgaaacaactattgcaatggtgtggcgaagatttcgatggtctgataattttcgat
gaatgtcaccgcgcgaagaatctgtgtcctacagggagttcaaaacctactaagacagga
ttgacggtcttggaactgcagaataagcttccgaaggctagagttgtatacgccagtgca
accggagcttctgaacctcgcaacatggcctacatggtacgactaggtatgtggggtgag
ggcacgcctttcccggagtttactggttttattactgctgtggagaagcgcggtgtcggc
gcgatggaaatcgtagcaatggacatgaagctgcgcggcatgtatatcgctcggcaattg
agttttcacggtgttgccttcaaaatcgaggaagtacctctttccaaggattttacaaaa
atttacgatcattcagtgcgattgtgggtggaagcgatgcagaggttccaggaagcggca
gagttaatagatgcagaaaatcgtatgaagaaaacaatgtggggccaattttggtcggca
catcaacgctttttcaaatatctttgtattgctgcgaaggtaaaacatgcggtgtcagta
gctcgcgaggcagtcaagtgtggcaaatgcgtggtgatcggtttacagtctactggtgag
gcacgtactttggaacagttggaacgtgacgacggcgagctcagcgacttcgtttctact
gcaaagggagttctgcaaacgttagttgaaaaacattttccagcgccggatcgtagtcgc
atccaacgtcttctcggtttagaaccaccaaaattcaaattagaggatgatgatctggac
gctggcggttctgctggaggcagcaagaggaaaccgatccgtcaagcagcacagcgtgca
acgaaaaaagtgcgctcttggtcatcggaagaagagatatcagacgaagaaaaaaacggc
gctcacagttccggctctgaatacaaattgagtggcaccgaaagtgaggacgatcatcat
acggacgaagaaagcaacgccagttctgatttcaatccgttcttcagtgatagcgattct
gacgttgatccttgggataggcgaaagaaaaagggcaagaagcagaagaaacccgcgaag
aaacgtttgagcacgcaggacaaaatccaatcaatgttagtgcataaacagtccagtaat
aaaagtaaacgtaacggcgacacggcgatgagtgggtcaatgagtgctacgggcggaagt
gtgccccaaaatcaagcaccgcctagagacgctatcgaaagagcttgcagcatgaaagag
gagttattatcacaaatagaaattcttggcgatcgattgccgccaaatacgctagatcaa
ttgatagatgagcttggcggaccagaaaatgtcgcggaaatgactggtagaaagggtcgc
gtcgtgcaaagggaagatggtggaatagaatacgagtctaggtcagaggtggatgttcct
ttagaaactcttaacttgacggaaaaacagaggtttatggacggagagaagactgtagcg
ataatctccgaagcagctagtagtggtatatcattacaaagcgacaggcgagctagaaat
caaatgcgacgtgtgcatatcacgctcgagttaccgtggagtgcggacagagcgatacaa
caattcggacgaacgcatcgatcgaatcaggtcaacgcgccggagtatatatttcttata
tcggatttggccggagagaggcgatttgcctcgatcgtcgcgaaacgtctggaaagtttg
ggtgcattaacgcacggtgatcgtcgcgcgactgaaacccgagatctctcgcaattcaat
atcgacaacaagtacggtcgttcggctttagaagcgacgatgaaaactataatgggatac
gaaccgccgttagtaccaccacctcaggattatcaaggtgatttctttaaagatgtggcg
gacgcgcttgtaggtgtcggtttgatttgcaatagcgagagtacgcccggtgtgctcacg
ctcgataaggattacaacaacatgtcaaagttcctgaatcgtatacttgggatgccagtt
gatctgcaaaatcgtctgttcaaatacttcaccgacacgctcaacgccattgtaactcag
gccaagaagaccggtcgtttcgatatgggtattcttgatcttggtacatcaggcgagaat
gttcgcagggtacgtctttatcggtttctgcggaaacacgcgaccggtaaagcaccaacg
gaactacatgtagtccatgtcgagcgcggtatgagctggtccgaggtcacagacaagttc
tcggagctgactggagctaaggagggtttctatctgagtcatcagatccgcaatggcaaa
cagacggccattctctcggccgtggtggacagtagcaagaaaaagtccgaaagcaagaag
gatcagctttatatggtgtataggcccaacacgggtctgcagttacgacaagagactcta
ggcgaattagagaagaagtacaagaaggtaagcgcagatgaggcggagccacactggaca
caacagtacgaagcttctgtgaatacgtgttcgcatgcgtattggagtggcaattgtaaa
aacacctctcttggcatagattgcgaagtgggtctgagaagacgttcctataatgtatta
gctggttcagttctgagtgtttggagtcgtgttgaaaatgtgctcgctacgcgatccgga
cataactctaagatgcaagttatacggctacgtacggatgaagggttgaagattgtcggg
acgttgatcccaaagtcttgcatggagtcgctacgtcaagcgctttcctctgacgcagag
aagacagaggaacagacattttga
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