Trachymyrmex septentrionalis: 108756493
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Entry
108756493 CDS
T11226
Name
(RefSeq) RB1-inducible coiled-coil protein 1-like
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108756493
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tsep01009
]
108756493
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsep04131
]
108756493
03029 Mitochondrial biogenesis [BR:
tsep03029
]
108756493
Protein phosphatases and associated proteins [BR:
tsep01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108756493
Membrane trafficking [BR:
tsep04131
]
Autophagy
Autophagosome formation proteins
ULK complex
108756493
Mitochondrial biogenesis [BR:
tsep03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
108756493
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG17_like
ATG11
Ig_NUP210_15th
Motif
Other DBs
NCBI-GeneID:
108756493
NCBI-ProteinID:
XP_018355862
LinkDB
All DBs
Position
Unknown
AA seq
1354 aa
AA seq
DB search
MPATYQTLCARAHLAQQCCGLAREQTRICERLVHDQHLQQQGWAAVVANLEDITHMFQSR
AEQFQQAFVLYLAERQQHMKLLDNFSADLGTLAKIPILPALRAQAEGLLSPDDQPSQTSE
TASEDSGEVLSLLRWISAKDNQSSLEQVAEQCSRGLEQFDERLMQALKAEVNGAVDNANK
QDMKEIKGLGERLFALEQLMVQTKRLVHEQGELAQGFLQNQNRASNLGDASVLPDLCNSH
RRQLLVMLQNHNQLRDIRRRCTKAKEELSVNIYHRLKWIMYVENKMVEVGNKLIIYHESL
KRLRRHLEVLQQIHLAPQMYISAVVEVVRRRTFSQAFLVWASNLACQLLTVHSEELARRR
EFQSKFDGHFLNTLFPGLEDTPPPFATQAPSVFDNGLPKLTADDMESLRSQLPDLALTIS
TPDLSSITQFFLSKSFTEGSTDGTKEKDTTSVSTDIPAKEQERTRAPLLSDRGDFESETD
TEEFEKIGQAGVEVTKPGVFDGAKQKRQKQLEVGASRSVSPASSTSTNVSPLNSKVADLT
TRSTTSSEPGSFQFPSLSATSERPVQLSPLTECVENGAADSSSCLLRRGVNGLSNYRDAI
PLEEQHSLSPNPPSLRSSVMCDGQHQQHQHPLSGSGGSSPSVGVGATDFMGTEFYMDESL
PSSLSEHPADGQHQAIVSLLQENLGNTREEVERLRSILKTMKTVVCEELSSVRNELAILR
NQSNEDKNGIVEMTERVRVALSLHSREYDRRLQEREQEMTIEHEYEIADVKKLMQSREEE
ICTLKRSLLEKETELAEHERLVATMRQKLEDEQIERRNLHDRLHQQLEDYSRVLEQARID
KEEAVKKLNDERFLEITSLTNSLTQCQKRIQELEENLVTARNDQERMVKEATDKLQMEYK
TELETIRSRFKLMTASTMERSPSDSSLEKIERTDVIELVNHEAILAQAREDMKIENAMAV
RTAIIKERADCMAKLDNELRLAKEVVEEKNREIEMYRMRTAALIEQGKHYKHTIDRLLGD
FELKSEIQQTLMEKMKNLEADKACLENKEIADKAMRTVLEQNDDIVYPLEAGVCKDLSYD
RLDAGQILEDIFKESEKYEVEVSESKKVRLEADDDDLARLSRRLESLENDNKRLSCELNS
IRASKIAAEAKLEALMTDKIRLEVELLKERTKRTFGIDPMPENRDKDMNASVAVVSDSNS
SRDAATSPEPTSRRSSSKSMCFHPSLPSYIHKKVAEKVAKMVQQGIVTVTSCNPGDVVLV
VWDAVHSNYAVYQESSTFYFLHSDCVGAVEGMNPNASRKCVLAEVIDKEYCHARKHENRY
HVPRGTKFYRVHAKPRDARALTDETSLMSKSQLP
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atgccagccacttaccagaccctttgcgcacgtgctcatttggcccagcagtgttgcggc
ctggcacgtgagcagacgaggatctgcgagaggctggtccacgatcagcatctccagcaa
caaggctgggccgcagtagtcgccaatctcgaggacatcacgcatatgtttcaatcacga
gccgagcagttccagcaagccttcgtcctgtacctcgccgagagacagcagcacatgaag
ctccttgataacttcagcgctgatctcggcactcttgcaaaaattccaattttaccggcc
ttgagagctcaagccgagggcttgttgagtccggatgatcaaccgagtcaaacttccgaa
actgcatcggaggacagtggggaagtactaagtctgttacgatggatctctgcgaaagac
aatcaaagcagcctagagcaagtggcagagcaatgctcgcgtggcctggagcagttcgat
gaacgattgatgcaggccttgaaggcagaagtgaacggggctgtcgataatgctaataag
caggatatgaaggagattaagggcctaggcgagaggctatttgccctggaacagctgatg
gtgcagaccaagagacttgttcacgaacaaggtgagcttgctcaaggtttcctgcagaat
cagaatcgcgcgagcaatttaggcgatgcgagcgttctgccagatctttgcaattctcac
cggcggcaattgctcgtcatgttgcaaaatcacaatcagctgcgcgacatccgccgcaga
tgcaccaaggcgaaggaagagttgtcggtgaatatctatcatcgcttgaagtggatcatg
tacgtggagaataagatggtggaagtgggcaacaagttaatcatatatcacgagagcctg
aagcggttgcgacggcatctggaggtgctccaacagatccacttagctccgcagatgtat
ataagcgcggtggttgaggttgttagaaggcgcaccttctcgcaagctttcctcgtatgg
gcaagcaatctggcgtgccagctgttgactgttcacagcgaagagttggcacgtaggcga
gagtttcagagcaaatttgacggccacttcttgaacactctcttcccaggtctggaggac
acaccaccgccttttgcaacgcaagcaccttccgtttttgacaacgggttacctaagctg
accgcggacgacatggagtcattgcgatcgcagcttccggatttggcgcttacaatttct
acgccggatttgagcagcataacgcaattcttcttatcgaaaagcttcaccgaaggtagt
accgatggtaccaaggagaaagacaccacatcggtgagcactgatattcccgcaaaggaa
caagaacgcactagagcgccattgttatctgataggggcgattttgaatctgaaactgat
acggaggagttcgagaaaattggtcaagccggtgtggaagtaaccaagcctggcgtgttc
gacggggcgaaacagaaacggcagaagcaattggaggttggtgcctctcgaagcgtgtcc
cccgcttcctcgacctcaactaacgtctccccgttaaactcgaaagtcgcggatttaaca
acacgttcgaccacatcaagcgaacccggctctttccaatttcccagtctatccgccacg
agcgagcgtccggtgcagctaagtccgctgaccgagtgcgtggagaacggcgccgccgat
tcttccagttgtttgcttcgcagaggcgtgaacggtctgtcgaattatcgtgacgctata
ccgctcgaggagcaacattccctgagtccgaatcctccttccttgcggtcctccgtcatg
tgcgacggccagcatcagcaacatcagcatccgctatccggtagcggaggtagcagtccc
tccgtcggtgtaggtgctaccgacttcatgggtacggaattttatatggatgaatctctg
ccgagcagcctcagcgaacatcccgccgacggccagcatcaggctatcgtgtccctcctt
caggagaatctcggtaatacgcgtgaggaagtggaaaggttgcgttctatcctgaagacc
atgaaaacggttgtatgcgaggagctcagttccgtgcggaatgaattggcgattctgcga
aatcaatctaacgaggacaagaatggcatcgtcgagatgacggagcgcgttcgagtggca
ttgtccttgcactcgcgagagtatgatcgacgtcttcaagagcgtgaacaggaaatgaca
atcgagcacgagtacgagatcgcggatgttaagaagctaatgcagagtcgtgaggaagag
atttgcacgcttaagcgtagtcttcttgaaaaggaaactgaattggcggaacacgagcga
ctggtggctacgatgcgtcaaaaattggaagacgagcaaatcgagaggaggaacttacat
gatcgtttacatcagcaactcgaggactattcgagggtactagagcaagcgcgcatagac
aaggaagaggccgtgaaaaaattgaatgacgaaagatttctcgagatcacttctttaacg
aattcattgacacaatgtcagaagcgaattcaagaattagaggagaatctggtcactgcg
cgcaacgatcaggagagaatggtgaaagaggcaactgataaattgcaaatggaatataaa
acggaattagagaccattcggagccgcttcaaacttatgaccgcttctactatggaaagg
agtcctagcgattctagtttagagaagatcgaacgaacagatgttattgagcttgtaaat
catgaagcaattttggcacaagcaagagaagacatgaagattgagaatgctatggccgtc
cgtactgcaatcataaaggaaagggccgattgcatggcaaaattggacaacgaattaaga
ttggcgaaggaagtagtcgaagagaaaaatagggaaatagaaatgtacagaatgagaacg
gccgcgctgattgaacagggcaaacattataagcatacgatagatcgattacttggagat
tttgaactgaaatcggagatacagcaaactttgatggagaagatgaaaaatcttgaagcg
gataaggcatgtttggagaacaaagaaatcgcagacaaagcaatgcgaacggttttggaa
caaaacgatgatatcgtgtatcctctagaagctggagtatgcaaagacttgagctacgat
cgattggatgctggtcaaattctagaggacattttcaaggaatccgaaaagtatgaggtt
gaggtctcagaatcgaagaaagtacgattagaagctgacgatgatgatctggctcgacta
tcgaggcgacttgaatctctcgaaaatgacaacaagaggctgtcttgcgagctaaattcg
atacgcgccagtaaaatagcggccgaagcaaaattagaggcattaatgacggataaaatt
cgtttggaggttgagttgctgaaagaacgtaccaagaggacatttggtattgatccgatg
ccggaaaatcgcgacaaagacatgaatgcgtcggtcgcagtagtttcggactctaattca
agtcgggacgcggccacgagtccagaaccgacgagtcgacgatcatcttccaaatcaatg
tgcttccatccctcccttccctcatacatacataagaaggtcgcagaaaaagtggcaaag
atggtgcaacaaggaattgtgaccgtcactagttgtaatccaggtgatgtggtactcgta
gtctgggacgctgtacatagcaattatgcggtgtatcaggaatcttcgactttttatttc
cttcattcggactgcgtaggtgcagtggaaggaatgaatccgaatgcttctcggaagtgc
gttctagctgaagtgatcgataaggaatattgtcatgcgagaaagcatgaaaatcggtac
cacgtcccacgtggcacgaaattctacagagtgcacgctaagccacgagatgcacgtgcg
ctgacagacgagacgagtttgatgtcaaagagtcaactaccgtaa
DBGET
integrated database retrieval system
