Trachymyrmex septentrionalis: 108756552
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Entry
108756552 CDS
T11226
Name
(RefSeq) host cell factor 1 isoform X1
KO
K14966
host cell factor 1
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03083
Polycomb repressive complex
tsep04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108756552
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
108756552
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tsep01009
]
108756552
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsep03036
]
108756552
03029 Mitochondrial biogenesis [BR:
tsep03029
]
108756552
Protein phosphatases and associated proteins [BR:
tsep01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108756552
Chromosome and associated proteins [BR:
tsep03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
108756552
HMT complexes
COMPASS/SET1 complex
108756552
MLL-HCF complex
108756552
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
108756552
Mitochondrial biogenesis [BR:
tsep03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
108756552
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_2
fn3
Kelch_FKB95
NANM
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
108756552
NCBI-ProteinID:
XP_018355942
LinkDB
All DBs
Position
Unknown
AA seq
1598 aa
AA seq
DB search
MAAPMLKWKRIANPTGPQPRPRHGHRAVAIKDLMVVFGGGNEGIVDELHVYNTATNQWFV
PSTKGDIPPGCAAYGFVVDGTRIFVFGGMVEYGKYSNELYELQASRWEWKRLKPKPPKHE
PPPCPRLGHSFTLIGNRVFLFGGLANDSDDPKNNIPRYLNDLYTLELLPNGHTAWDVPQT
HGHAPPPRESHTGVAYTDRTTGKSCLVIYGGMSGCRLGDLWFLDVDSMTWNKPVVHGPTP
LPRSLHTATLIGHRMYVFGGWVPLVVDDVKVATHEKEWKCTSTLACLNLETLTWEQLTVD
SLEENVPRARAGHCAVGVHSRLYVWSGRDGYRKAWNNQVCCKDLWYLEVSKPAAPSRVQL
IRASTQSLEVSWTVSPSAQYYILQIQKYDMPPVAATGSAYPLVSAPTPTAPIVSTPVAIT
TSTMVATPATVPVTSPPVTTMAALPTTTPPVAAAVRAASVATAVATAVATPLRVQSASPV
QKPVPSQAVQKSTSPMTPRVATGNVIRIRSPLVTSSAAVATAAMAVVTTEQQQTTVTTIT
TTTTTTAGQTPAAMSGIAALAAAAAATPKITMNNVSIVPQTAVAAATASNTIRMKNVQPG
QQIRFAAPGATVLRTASPQQSKQIILQKPGQNIAGQPQIVHLLKTGQGMVVPKVSLIPGK
SVQTTGAKPLNQGPTILRLVNPNTVAGSKILTTMKTSNIVAMSKGQNITGKQTIMITKPT
GNSGLVGRTNQFIVVTTGSGLRAVQAVTTSQAGAGQGATSVATPVNVLPLSATNHVTNQQ
GVKMIVVSSGAMGGGTAGKPLTITVPGQGGVPKTVTIAAKTGAQTIFNTGKNQLVTVPQI
QKAPEAVAVSGKPVTLQMPAGISAKTVTLLPTSSSSIVTTSSASDSIDASKMLFVSSQKQ
PSASLASTSDGPATTDAALAALAAEAGLIDPVQESSGGLSFMVATDDGAGGDDKMEDSCN
GNEASTAAALVSQMSAGEPMQVDGDGNFVLPQVDGPIDDLLLEDEEKMDVDEEPAAENAT
ELSNAESAEITEQNVDVSENIQTEESAVKEVAEAGEKNEGATTADLPESITTSETEKAEN
VDNSSVDDKAAMEINADDSELPSEKEEIKDSQSVVDDEKVIKSELPLVQSAVEASSEQTS
LTDVVNPTTEINETQQDEDSLVKDIKCESLSENEKSLISENLTEDTAASQQPQDDTQKIE
IKDEIEDLESDLPTESSLIKSNEDDEPMITDNSTAIAADNVITPVIIPTIQMKSEPEDEF
IKHEQAILPDLPISPINGVAAPVEKEVEKVHTPMKMEVKDDFVISKKENLQREKQEKIND
ARSETGDDSTALTTLATAALGSSAEPTMKIKNEQSEEEKKEAEWYDVGVIKGTCFTVQHY
YLPGDEPLDVTQNLTMDVFKGRTKIAVEPGTAYKFRVAAVNSCGRSPWSEVAAFKTCLPG
FPGAPSAIKISKSVDGAQISWEPPSSNVGPILEYSVYLAVRSTALNNDGEPKTVVSNPNQ
LAFIRVYCGSSNSCSVNNSALNAAHVDTTTKPAIIFRIAARNDKGYGPATQVRWLQADPT
TAVKSNSQAKRPASTDLRSQVTSPQKKMKTEPPSDNFS
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacccatgctaaagtggaagcggatcgcgaatccgaccgggccccagccgcga
cccaggcatggccaccgggcggtcgccattaaggatctcatggtcgtttttggcggcggg
aatgagggtatcgtagacgagctacacgtatacaatacagcaacaaatcagtggtttgtg
ccttcgacgaagggagacattcctccaggttgtgcggcatatggttttgttgtcgatggt
actcgcatctttgtctttggtggaatggtagaatatggcaaatattctaacgagttgtat
gaactacaagcgagtcgatgggagtggaaacgtttgaagccaaaaccacctaagcatgaa
ccaccaccatgtccacgattaggacatagttttactctcattggtaatagggtcttcctt
tttggaggtctggcgaatgacagtgatgacccgaaaaataatataccgagatatttgaat
gatctatacacgctcgaacttcttcctaatggccatacagcctgggatgtgccgcaaacg
catggacacgcgccacctcctagagaatcccatactggagtggcatataccgatcgtacc
acaggcaagtcttgtctagtgatctatggtggcatgagcggttgccgtttaggtgactta
tggttcctcgatgttgattcgatgacttggaacaagccagtagttcatggacctacccct
ttaccacggtcacttcatactgccactttaatcggtcatcgaatgtatgtgtttgggggc
tgggtgccattggtcgtcgacgatgttaaagtcgcgacacacgagaaagagtggaaatgc
acaagcacgctagcatgcttgaatctagaaactctcacttgggaacaattgactgttgat
tccttggaggagaatgttcctcgtgctcgtgctggtcattgtgcagttggtgtacacagt
agactttatgtatggtctggtagagatggttatcgcaaagcttggaataatcaggtttgc
tgtaaagatctgtggtaccttgaagttagtaaaccagcggcaccttccagagttcagctg
attagggcttccacgcaatcgttggaagtcagctggacagtaagcccgtccgcgcaatac
tatattcttcaaatacaaaagtatgacatgcctccagtagcggcaactggtagtgcctat
ccgttggtaagcgcaccgacgccgactgcgcctatcgtcagcactcctgttgcgataaca
acctccacaatggtagcaactcctgcaactgtacctgtcacatctccgcctgtgactact
atggccgctcttccaacgactacaccacctgttgctgccgccgtcagagctgcatccgtt
gcgacagctgtggcaacggcagtagcaactccattacgagttcaaagtgcaagtcctgtg
caaaaaccagtaccatcgcaagcagtgcaaaagtcgacaagtcctatgaccccgagagtc
gcaaccggtaacgtcatacgtattcggtctcctctggtcacttcctcagcagcagtggct
acagcagcaatggcagtggttaccactgagcagcagcaaacaactgttactactatcact
actaccactacaactacggctggtcaaacgcccgctgccatgtctggaattgctgctttg
gccgcagccgcagcagccactccaaaaattactatgaacaatgtttcgatcgtgccacaa
actgcagttgcggctgcgactgcatccaacactatcagaatgaagaacgtacagccgggt
cagcaaatacgtttcgctgcacctggcgcgacagtgttgcgtactgcttcaccacagcag
agcaagcagatcatactgcaaaagcccggccaaaatatagctggtcaaccacagattgtg
catcttttgaaaactggacaaggaatggtagtacctaaggtaagccttatcccgggcaaa
agtgtccaaacaaccggcgcgaaacctcttaatcagggaccgacaatactgcgattagta
aatcctaatacggttgcgggatcaaaaatcctcacgactatgaaaacgtccaacatagtg
gcgatgagcaaaggacagaacattacgggcaagcaaaccataatgatcactaaaccgaca
ggaaatagtggattagtcggcagaaccaaccaatttatcgttgttaccacaggctctggt
ctaagagctgtacaagctgtaacaacatcacaagctggtgcaggacaaggagctacttct
gtagctactcctgtaaatgttttgccattatcagctaccaatcatgtcacgaatcaacaa
ggagtcaaaatgattgttgtttcctctggtgcgatgggcggtggaacggctggaaaacct
ttaaccatcacagttccaggacaaggcggtgtaccaaagacagtgactattgctgcgaag
accggtgcgcaaaccatctttaatactggcaagaatcaactcgttacagtaccacagata
caaaaggcacctgaagccgtagctgtatctggaaaaccagtgactttgcaaatgcccgcg
ggtataagcgcaaagacggtgacgcttttaccaacaagtagtagctccatagttactact
tctagtgcgtcagattcaatagacgctagcaaaatgctgtttgtttcatcgcaaaaacaa
ccatcagcttctctggcatctacttctgatgggcctgctactactgatgctgcattagct
gcattagcggcagaagctggtctgatagatccggttcaggaatcatctggtggtttatca
ttcatggtagctacggatgatggtgccggcggtgatgataaaatggaagatagctgtaat
ggtaacgaagcgagcacagcggctgctttagtttctcagatgagtgcaggagaaccaatg
caagttgacggtgacggaaactttgtgcttccgcaagtagatggtccgatagacgatctc
ttactagaagatgaagaaaaaatggatgtagatgaggaacctgctgcggaaaatgctact
gaattgtctaacgctgaatcggcagaaataacagaacaaaatgttgatgtatccgaaaat
attcaaacggaggaatcggctgtaaaagaagttgccgaggctggagaaaagaatgaagga
gcgacaacagccgatcttcctgaatcgattaccactagtgaaactgagaaagctgaaaat
gttgataattcatcagtagatgataaagcagctatggaaattaatgctgatgattcagag
ttaccaagtgaaaaagaggagataaaggattctcaatcagtagtcgatgatgaaaaagta
ataaaatccgaattgcctttagtacaatcagccgttgaggcttcatctgaacagacttct
ctaacggacgttgtgaatccaacaacggaaatcaacgaaactcagcaagatgaggatagc
ctggtgaaagacattaagtgtgagtcgttgtctgaaaacgaaaaatcgctaatatctgaa
aatcttaccgaagacacagctgcatcgcaacaaccccaagacgatactcagaaaattgag
ataaaagacgaaattgaagacctggaatctgatcttccaaccgagagttctcttataaaa
tcaaacgaagatgatgaaccgatgattactgataatagtacagcgattgcggcagataat
gtaataacccccgttattataccaaccattcaaatgaaatcagagccggaagatgaattt
ataaaacacgaacaggccatattgcccgatttgcccatatcaccgatcaatggtgtcgct
gcacctgtcgagaaagaagtggaaaaagtacatactcccatgaaaatggaggtaaaagat
gactttgtcatttcaaagaaagaaaatcttcaaagagagaaacaagaaaaaattaatgat
gctagatcagaaacaggagatgattcaacagctttgacaacattagctactgctgcttta
ggatcgtcggcagaaccaacgatgaaaataaaaaatgaacagagcgaagaagaaaagaaa
gaggcagaatggtatgatgtgggagtgataaaaggaacttgttttactgttcagcattat
tatcttcctggtgatgagccattagatgtaacacagaatttaacaatggatgtttttaaa
ggaagaactaaaatagcagtagaaccaggaactgcctacaagtttagagttgccgctgtg
aatagttgtggacgaagtccttggagcgaggtagcggcattcaagacgtgtcttccggga
ttcccgggcgcaccgagtgctataaagatatcaaaatctgtagacggtgcacaaatctct
tgggaaccaccttctagtaacgttgggcccattctcgaatattccgtctatttggcagtg
cgaagtaccgcgttgaacaatgacggagaaccaaaaacagttgtgtcgaatccaaatcag
ttagcttttattagagtttattgcggttcgagtaattcttgttcggtgaacaatagtgcc
cttaatgccgctcacgtagacaccactacgaaaccggctataatctttagaatagcagca
cgaaacgacaaaggatacggaccagccactcaagttaggtggttgcaagcagatccaacc
actgcagtgaaaagtaattcgcaagcgaagagacccgctagcacagatctacgctcgcaa
gtgacttctccacagaagaagatgaaaacggaaccacctagtgataatttctcgtga
DBGET
integrated database retrieval system