Trachymyrmex septentrionalis: 108756580
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Entry
108756580 CDS
T11226
Name
(RefSeq) CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108756580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsep03019
]
108756580
Messenger RNA biogenesis [BR:
tsep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108756580
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
108756580
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
108756580
NCBI-ProteinID:
XP_018355995
UniProt:
A0A195FTE0
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
MANLNFEQPPRSIANASLTSRAAVAGGGLNTVALAGHVTPTSGMFSGSSASTSSTANSAI
ITTNVYPGASGSGGGQNNHQQQQQLSPMGSRGLFGQRAFTDRRTMPALGASNPMGSMGSF
GLPPSRNYGSQGAVNNFHSVFGSGGGGDTSTPPLLDLSEFPSLTNRGQGDSMPQPSPMPG
KQPYVGMVKQPTSESSEFTMSSEDFPALPGTQNREGPSPGGSMSGDKNIPVGLGPEIGQD
VLQANRAPGSEKSQSSKRGIQTSPDGKVTNIPASMVKDQFGMVGLLTFIRAAETDPNLVS
LALGQDLTALGLNLNSPENLYQNFGGPWAETPCRPQDIDFHVPPEYLINAAIRDKLAPVK
LNRYKDDLLFYMFYTNVGDVLQLAAAAELYSREWRYHMEEKVWITQAPGLGIVEKTSTYE
RGTYYYFDAQNWRKVAKEFHLDYAKLESRPHLPSNFHQTQP
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggccaacttgaactttgaacaaccgccacgcagtattgcgaacgcaagtcttacttca
cgtgctgccgttgctgggggaggtttgaacaccgtggccctcgcgggtcatgtcacgcct
acctcgggcatgttctcaggctcgtccgcaagtacttcgagtacagccaattcagcgata
atcaccactaacgtttatcctggagcatctggttctggcggtggacagaataatcatcag
caacagcagcaactctctcctatgggcagtagaggactgtttggacagagagcttttact
gatagacgtacgatgcctgctcttggagcttcaaatccaatgggtagtatgggcagtttc
ggattacctccaagtcgcaattacggatctcaaggtgcggttaacaatttccactctgtt
tttgggagtggaggtggtggagatacaagtactccacctctgttagatctctcggagttt
ccctccctaacgaatagaggtcaaggtgattctatgccgcaacctagtcctatgccaggg
aaacagccttatgttggaatggtaaagcaaccaacatccgaatcgagcgaatttacaatg
agctcggaggattttcctgcattaccgggaacgcagaatcgagaaggtccatcacctggt
ggtagcatgtctggtgataaaaatattcctgtaggacttggtcccgaaatcggacaagat
gtgctacaggccaacagagcacctggatctgagaaatctcagtcttctaaaagaggcatc
caaacatcgcccgatggcaaggtgacgaatatacctgcgagcatggtgaaggatcaattc
ggcatggttgggcttttgacgtttatcagagcggcagagacagatccgaacttggtgtcg
ctagcgttaggtcaagatctcactgcattaggacttaatttgaattcaccagaaaatctt
taccagaattttggtggcccctgggcggaaactccgtgtcgaccacaggatatagatttt
cacgtaccaccagaatatcttataaatgccgcaatcagggataagctagcgccagttaaa
ctaaatcgatataaagatgatctactgttttatatgttttatacaaatgttggggatgta
ttgcaattagctgctgcggcggaattatacagcagagagtggcgatatcatatggaggaa
aaagtttggataacgcaggcaccaggtttgggaattgtagaaaagacgtcgacatatgaa
cgtggtacttattactattttgatgcgcaaaactggagaaaggtagctaaggaattccat
ttggattatgcaaaactagaaagtagacctcatcttccttcgaactttcaccaaactcag
ccttga
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