Trachymyrmex septentrionalis: 108756915
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Entry
108756915 CDS
T11226
Name
(RefSeq) DNA repair protein RAD50-like
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03440
Homologous recombination
tsep03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108756915
03450 Non-homologous end-joining
108756915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsep03032
]
108756915
03400 DNA repair and recombination proteins [BR:
tsep03400
]
108756915
DNA replication proteins [BR:
tsep03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
108756915
DNA repair and recombination proteins [BR:
tsep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
108756915
BRCA1-C complex
108756915
NHEJ (non-homologous end-joining)
MRX complex
108756915
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_15
Rad50_zn_hook
SMC_N
AAA_21
ATG16
AAA_29
AAA_16
ABC_tran
AAA
AAA_5
Motif
Other DBs
NCBI-GeneID:
108756915
NCBI-ProteinID:
XP_018356590
LinkDB
All DBs
Position
Unknown
AA seq
1369 aa
AA seq
DB search
MSKVRKLALRGIRNFGDDSEDAIIRFSCPLTLILGPNGTGKTTIIEALKYATTGEFPPGS
EKGKSFIHDPMLATTGSVRGVVKAEVIDNMGTSYVVSRTIESSKEKKKFKTLDSTVTKTS
KDKKQKDSITNKCANVDAEIGIALGVSRSILNYVIFCHQDELNWPFDQGKLLKERFDEIF
DSARFNKALETISKLQKELQSDIRTLNAEKQTYKVLMSEVQDKETKLKEQKKRLDTTKEK
INDIDKQLEPVKQKLEEVQKFHSEYKNIQTEEEKKKMEFDMHKDRYEKLKKSIRNIYEGT
TEELNALIESYDTILTEKNVEIAENEAEIKDISRKETRISNILATRRETVGTLKQQVKDN
ERRVIRRNQLLNDALQAWNFDTVESDVSEIEVKALTKRLEEKMRALEKQIEENRLGMQRE
EKELQREVDMLRSNYSKIESEKILKEKEITDIRDEIDTIRNDITQIGAAGNKLKSIEQER
KTEKQKIDELVNAVNVDSLEAEKADKVKSKYKIEASLSSIDDEIFSLHKLSSLMAELEIR
KSALQAKEEELKNLKRKHGDSIKILLNIQELEQTKLKDTLERVHQKLEKETNSLTREIQA
QERKTTAFETTVRHIESDIKKKTIELHNNKEKISEVCDYKEFDETLLMQSTIVKDLQDKR
GIYAYQATAYKEYVKNLSVKNPCCPLCHRNFEKQNNVADLIKEIESDIIRNQPGRLKSCE
QELKIQQEKYDNMLQLKPIVEKVIQWEENDLKILEEKLKKTQNSVAQSKMAVKNLEASKT
EPEKKLLLYKNMIGDIKFWDRCIDEIQQLKGAVNNLETQMANSGIKTERTMEEAQAQRES
LRKSLRETCNHIDALQLRLTKHNEKLQNARAKYNELHEKELKIQFDMQKLKHLKDKQGDL
YTREITVGETVEKLRKDLAHAESELDSRSQQLEKTKVKNWQKQEADRKSMSESARRLSDL
HKILDEINSFISSNVLEKLASYEREIETYNNSLTELMNKKNDVEQTVSKLKEDIASQEIG
KRELLDNMSLRKIKETLETLKEQYKKLNEKLKNMNYEEMMKKWEQLENDKQVLLRQRNVA
LGTQEELERIIKQYTQELRKEEYRLARRNYTNKCIELTVQEDTIANLKAYNKILDTAMIE
YHEERMSTVNKIMKKLWKHVYKGTDTSSIEICTEPTDGVGSNRRSYNYKLIQTKHGCKMD
MKGRCSAGQKVLASIIIRLALAETFCKNCGILALDEPTTNLDEDNANSLADMLTKVVELR
SKYQKNFQLIIISHDEKFLQKLADLNNHKQFHELYRKHNGMTTVRISDFNEHMDSLLHVK
SEDESDEEQRPIQSTSGLGRDISNKKRYNLDNIDEDNRPPTKKRYRFTE
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagtacggaaactggctcttcgtggcattcgtaattttggcgacgatagcgag
gatgcaataatacgtttttcctgcccgttgacacttatcctgggcccaaacggcacggga
aaaactactatcatcgaggcattgaaatatgcaacaactggcgagtttccaccaggttct
gagaaagggaagtcctttatacacgaccccatgttggcaacaactggctcggtgagaggt
gttgtcaaagctgaagtaatcgataatatgggtactagttatgtagtatccagaacaatc
gagtcatcaaaagaaaaaaagaagtttaaaacccttgacagcactgtaactaaaacaagt
aaagataagaaacagaaagattcaataaccaataaatgtgctaacgttgatgcagaaatt
ggtatagcattgggtgtttcaagatcgatcttgaattatgtcatattttgccatcaagac
gaacttaattggccatttgatcaaggaaaactgttaaaagagagatttgatgaaatattt
gacagtgcaagatttaacaaagctttggagactatttcaaagcttcagaaagaattgcaa
agtgatattcgtactctaaacgcagagaaacagacttacaaagtactcatgtctgaagta
caggataaagagactaaactaaaggagcaaaagaaaagattggatactacaaaggagaaa
ataaatgatatcgataaacagcttgaacccgtgaaacaaaaacttgaagaagtacagaag
tttcattcagaatataagaatatccagactgaggaagagaaaaaaaagatggaatttgat
atgcataaagatcgatatgaaaaactgaaaaaaagcataagaaatatctatgaaggaaca
acagaagaattaaatgcgctcatagaatcttatgacactatattgacggaaaaaaacgtc
gaaatagcagagaatgaagctgaaatcaaagacatctccaggaaagaaacaagaatttct
aatatcttagcgacacgaagggaaactgtaggtacattaaaacaacaggtaaaagataat
gaaagaagagtgattcgtcgtaatcagttattaaatgatgcattacaagcttggaatttc
gatacagtagaatcagacgtatctgaaatagaggtgaaggctcttacaaaaagattagaa
gaaaagatgcgggcattagagaaacaaatagaggaaaatagattgggtatgcaaagagag
gaaaaggaattacaaagagaagttgatatgctgcgtagtaattattcaaagatagaatca
gagaaaatccttaaagagaaagaaataacagatataagagacgaaatagacacaattcga
aacgacataacacagattggtgcagcaggaaataaattgaagtcaatcgaacaagaacgt
aaaacagaaaaacaaaaaattgacgaacttgtcaacgcggtgaatgtagattctcttgaa
gccgaaaaagcagataaagtaaaatccaaatataagattgaagcaagtttaagctcaatt
gacgacgaaattttttctttgcataaattaagctcgttaatggcagaattggaaataagg
aagtcagcattacaagctaaggaagaagaattgaagaatttgaagagaaagcacggagat
agcatcaaaatactattaaatattcaagaattagaacaaacaaaattgaaagatacttta
gaacgtgtacaccagaaattggaaaaagagacaaattccttaacacgagagattcaagct
caagaacgtaaaactactgcttttgaaacaacagtacggcatatagaatccgatattaag
aagaagacgatcgagttacacaataataaagaaaagatatctgaagtgtgcgattacaaa
gaattcgatgagactttgttaatgcaatcaacgattgtgaaagatcttcaggacaagaga
ggaatttatgcttatcaagctacagcctataaggaatatgttaaaaacctatccgtaaag
aatccttgctgcccgttatgtcatagaaattttgagaagcagaataacgttgcagattta
ataaaagaaattgaaagcgatataatacgtaaccaacccggtcgtttaaaatcatgcgaa
caagaactaaagatacaacaggaaaaatacgacaatatgttgcaattgaaacctattgtc
gagaaagtcattcagtgggaagaaaatgacttgaaaatattagaagaaaagttaaaaaag
acacagaacagtgtggcgcagtcaaaaatggctgttaagaatctagaagcctcaaagacg
gaacctgagaaaaaattattgctatataaaaatatgattggcgatattaaattctgggat
cgatgcatagacgagatacagcaattgaaaggagcagttaataacttggaaactcaaatg
gccaattctgggattaagactgaaagaactatggaagaagcgcaagcacagcgagaatct
ttgagaaaatcccttagagaaacttgtaatcatattgatgcattgcaactcaggttgacc
aagcataatgaaaaactgcagaacgctcgagcgaagtataacgagttacacgaaaaggaa
ttaaaaatacaatttgatatgcagaaattgaaacatttaaaggacaagcagggtgatttg
tacacacgagaaattactgtaggagaaacagtggagaaactgcggaaggatttagcacat
gctgagtctgaattggattccagaagtcagcaattggaaaagaccaaggtaaagaactgg
caaaagcaagaagctgatagaaaatcgatgtccgaaagtgctagacgtttgtctgatttg
cataaaatattagatgagatcaattcttttattagtagtaatgtactcgagaaactcgcg
agttatgaacgcgagatagagacttacaataattcgctaacggaacttatgaacaagaaa
aacgatgtagagcaaactgtaagcaagttgaaggaggacattgcctctcaagaaattgga
aaacgagaattacttgacaatatgtcgttacgtaaaattaaggaaacactagaaaccctg
aaagaacaatacaaaaaattgaatgaaaaattgaaaaatatgaattatgaagagatgatg
aagaaatgggagcaattagaaaacgacaagcaagtattacttcggcaaaggaatgtcgct
ttaggaactcaggaagagttggaaagaataatcaaacagtacacgcaagaattacggaaa
gaggaatatcgattggctcgtcgaaattacaccaataagtgtattgaattaacggttcaa
gaagatactatagctaatttgaaagcttataataaaatattggataccgcaatgattgaa
taccacgaggagcgtatgtcaacagtcaataagataatgaagaagttgtggaagcacgtt
tataaaggtacggatacaagcagcatagagatttgcacggaacctacggatggtgtaggc
agcaatagaagaagctataactacaaactgattcaaactaagcatggctgtaaaatggat
atgaaaggacgttgcagtgctggacagaaggtattagcgtcgataattataagacttgct
ttggcagaaacgttctgcaagaattgcggcattctcgcgttagacgaaccaacaacaaat
ctggatgaagacaatgccaacagcttagcagatatgctaactaaggtagtcgagttacga
tcgaaatatcaaaagaattttcagttaattataattagtcacgatgaaaagtttttacaa
aagcttgctgatttgaataatcacaagcaattccacgaactttatcgtaaacacaatgga
atgactacggtaagaatctctgatttcaacgagcatatggattctcttttgcacgttaaa
agtgaagatgaatccgatgaagagcaacgtcctatacaatcaaccagtggtttgggtaga
gatatatcaaataagaaaagatataatttggataacattgatgaagataacagaccacca
acgaagaaaagatatcgtttcactgagtaa
DBGET
integrated database retrieval system
