KEGG   Trachymyrmex septentrionalis: 108756936
Entry
108756936         CDS       T11226                                 
Name
(RefSeq) exosome complex component RRP41
  KO
K11600  exosome complex component RRP41
Organism
tsep  Trachymyrmex septentrionalis
Pathway
tsep03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tsep00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108756936
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tsep03019]
    108756936
Messenger RNA biogenesis [BR:tsep03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     108756936
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     108756936
SSDB
Motif
Pfam: RNase_PH
Other DBs
NCBI-GeneID: 108756936
NCBI-ProteinID: XP_018356640
UniProt: A0A195FUM7
LinkDB
Position
Unknown
AA seq 272 aa
MDPNQENDQGGLRVDGRRALELRQIRMRMGVFGQADGSAYIEHGNTKVLAAVYGPRQSRS
SASRNSTKAIINCQYSMAVFSFTSGERKRRPRGDWKSQERSAQLRHAMEAIIHLELYPRS
QIDVFVEVLQVDGSDYCASVNAATLALIDAGIPIKNYAIGCSVTLVNKPSGEDEDKTLAA
GVLDANYVEECSPGVTLSVVALAETNNDIEVGGNGLIVVAHGAGQRLHLSRLETLKQRVL
QGCQDIKNILDHGVRHHLTANLLPSFLHNSLD
NT seq 819 nt   +upstreamnt  +downstreamnt
atggatccaaatcaagagaatgatcaaggtggacttcgcgttgacggcagacgagcgttg
gaattgagacaaatccgtatgcggatgggagtattcgggcaggccgatggcagtgcatat
atagaacatggcaacacgaaggttctagcagcggtgtacggtcctcgtcagtcaagaagc
agcgcatcaaggaatagtacaaaggctatcataaattgccagtacagcatggctgtgttt
agttttacctctggtgaacggaagcgaagacccagaggagattggaaatcacaagagagg
tcagcacaattacgtcatgccatggaggctataatacacttagaactgtatccacgctct
cagatcgatgtcttcgtagaagttctacaagttgacggcagtgattattgtgcatctgta
aatgctgcaacacttgcattgattgatgctggaattccaatcaagaattatgccatcggc
tgtagcgtaactcttgttaacaagccgtcgggagaagatgaagataaaacgttagctgca
ggagtattagatgcaaactatgtagaggaatgttcgccaggagttactttgtctgttgtt
gcattagcagaaacaaataatgatattgaagtgggtgggaatggtttgatagtagtagca
catggggcaggtcagagattacatttgtcacgtttggaaacactcaaacaacgcgtgtta
caaggttgccaggatataaagaatatattggatcatggcgtgaggcatcatctaactgca
aatctgttgccttcatttctgcataattcactcgactaa

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