Trachymyrmex septentrionalis: 108757069
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Entry
108757069 CDS
T11226
Name
(RefSeq) nuclear pore complex protein Nup54-like
KO
K14308
nuclear pore complex protein Nup54
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108757069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsep03019
]
108757069
Messenger RNA biogenesis [BR:
tsep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108757069
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
108757069
NCBI-ProteinID:
XP_018356878
UniProt:
A0A195FSQ9
LinkDB
All DBs
Position
Unknown
AA seq
620 aa
AA seq
DB search
MSFGSGFGASTSTPAPTFAFGTTPASTATPVKPVPGFGTPSFGFSTPTTSTPSLFGSPST
QTTGFGTGTGFGTPTATGFGSAPSTGFGAAPTFGTPSSSAFGSAPAFGSTPVSSTTTGFG
TTSTFGSTPAPTTGFGGFGTGTTSTLSFGGFGGFGTATTTAAPSLFGGFGTPNTASTGFG
TSGFGAFGSKPVTTSGTFGGFGTGTGFTGFGTGLTQPQQQQQQQQQQPTNTASEALYNAV
FNCQLYNDERDNTIARWNLIQALWGTGKAYYSVNAPPIDLTQENSLCRFKAIGYSRIPDA
DNNDGLVVLCFNKKEKDVQDGKQQLIAFFNGLLGNKPNLTVTVDNIKSTGENKSQVTVYV
SEKGITGSYRKIPANELVAYLSQIMQKQQLVQNGVEDIFPLVKLDPSQLKEYLDNPPCAI
DARLWKQAQLDNPNPELYIPVPMVGFQQVKHRLKCQEEETARHRAFLDMAAEKIQGLQRQ
HTATQARLKEHRRTLLELQHRVLQVLVRQEITRKVGLSLQPEEEVLTRRFEAMHSQISAP
TQYKGRISEMLSQLRMRRHIDIQNQERYTMDPIAQDDIKAYLSMEQQGMAQLISTINADL
ESLKVIKDGMSELLMSQSIS
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcggtagcggcttcggagcgtccacatcgacgcccgcacctacgttcgcgttc
ggcaccactccggcgtccacagcgacgccggttaaacctgtgccaggatttggaacaccc
tcgttcggatttagtacaccgactacttcaacgccaagcttgtttggctcgccgtcgacg
cagactactggatttggtactggcactggatttggtaccccgacagccactggttttggc
agcgcacctagcacgggttttggagctgcacctacgttcggtaccccgtcaagcagcgcc
tttggttcggcaccagctttcggtagtacccccgtttcttctacaaccactggattcggt
acaacttcgacatttggcagcactcctgctcccacaactggtttcggtggttttgggaca
gggacaacatcgacattaagttttggaggtttcggtggatttggaactgcgaccactact
gctgcccctagcttgtttggcggattcggcactccaaacaccgcttcaacaggtttcggt
acatcaggtttcggtgcatttgggagcaaaccagttactaccagtggtacattcggtgga
tttgggacagggacaggattcacaggatttggtactggattgacgcagcctcagcagcaa
cagcaacaacaacaacaacaacctacaaatactgcatcagaagctctctacaatgccgtg
ttcaattgtcaattgtacaatgacgagcgagataataccattgccaggtggaatcttatt
caagcattatggggtacaggaaaagcttattactccgtaaatgccccacctatagacctt
actcaggaaaattcgttatgcagatttaaagccattggatacagtcgcatacctgatgct
gacaacaacgatggtttagtagtattatgttttaataagaaagagaaggatgtacaggat
ggaaaacagcaattaatagcattttttaatggtttgctgggaaataagcccaatctgaca
gtaaccgttgataatattaaatcaacgggggagaacaaaagtcaagtgacagtatatgta
tcggaaaaaggaatcactggttcttacagaaaaattcccgccaatgaattagtcgcatat
ttatcgcaaatcatgcaaaaacagcagttggtacaaaatggagtggaagatatatttcca
ctggtaaaacttgatccatcacagctgaaagagtacctagataatccaccttgcgctatt
gatgccagattatggaagcaagcgcagttggacaatccgaacccagagctgtatattcca
gttcctatggttggctttcagcaagttaaacacagactgaaatgtcaagaagaggaaact
gctagacatagagcgtttttggacatggcagctgaaaaaatacaaggcttgcaaaggcag
cacacagctacacaggccagacttaaggaacatagacgtacattgttggaacttcagcac
agggttctacaggtgctagtacggcaggaaattacgcgaaaagtgggattatccttgcaa
ccggaagaagaagttctaacacgcagatttgaagcaatgcattcgcaaatcagtgctccg
acgcaatacaaaggaagaattagtgaaatgctctctcagctcagaatgaggcggcacatc
gatattcagaaccaagagaggtatacaatggatcctatagcacaggatgatattaaagcg
tatctaagtatggaacagcagggcatggcgcagcttatttcgacaataaatgctgattta
gaaagcttgaaagtcattaaagatggaatgtcagagcttttgatgagccaaagtatatca
tga
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