Trachymyrmex septentrionalis: 108757169
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Entry
108757169 CDS
T11226
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108757169
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
RA_2
PDZ_2
Yop-YscD_cpl
RA_3
Motif
Other DBs
NCBI-GeneID:
108757169
NCBI-ProteinID:
XP_018357084
LinkDB
All DBs
Position
Unknown
AA seq
2128 aa
AA seq
DB search
MTVSEEMATELANKKAERDALRVVIQQWNANRLDLFELSEPNEDLEFHGVMRFYFQDSGQ
KVATKCIRVASDATSQAVIETLIEKFRPDMRMLSVPEYALYEIHENGEERKLDLEEKPLL
VQLNWHMDDREGRFLLKRIDDKTNAQGVGFTSAEGSSFRRKLSKREKKQIKKQEKLSRLK
SLEQDENAMPGDQNGVAEKLYTELPETSFTRSISNPEAVMRRRRQQKLERRLQQFRSKDG
GPDTGGTLKIYGEALCKDVPYKTLLLSVRDSAAQVVREMLSKYGLEKVDPQLYCLVQVNS
ENVSGNMHQEYILDDDECPLAILMNHPSTRGSIMFHVRRRPADYMPRKRKKKPTGKWNEL
DHKYEDERLPFLLELNPDGSDIPNGAGVRHRLQPNVTEVGSERPIGPQAVQAQTLTLPGP
MVMPRHCVIAFTENIVTLTPCSRDAHTYVNNQRIHQTTILQNGAIIKFGRMHTFRFIDPA
PEERIRQRHDSNKQIDYAYDRRSPDATSQDVSSEKFHPGSGTPNGGSQIPGQAQERATPS
SPSKSAVAAVRSPRSPTHPPEPTHNYETTFDLDGNVETASLSSSRDGNSRLSQYDRQPRG
TDPILPAVLEFLEETEETFLHAVITDIEPSAPQFKLAPTYTLYLSARYRASTHYRPELQP
TERAHRLTVMLANVATMIQRVIQERYMDASSLAFWLANGSELLHMLKSDRHVGAFSTRAQ
DILAEAVHTAFGSLVRCITLELTPAMTQFMADADEPAKEAGVLQIFSNTMALLRRCRVNA
ALTIQLFSHLFHAINATAFNTLVSNGNLCVRWFGRRLKARLNALETWAERQGLELASQCH
LATIMQATHLLQAPKYNAEELATLSSTCFKLNSLQVRALLQKYQPAADEPRLPAELIENV
VRVAESVADTLARADGREIRLEEEPVLGLALLLPEDGYSCEVIRGVPPGLAEFLTPLQRD
GLCRMAAQPSSSGYWTIYMIDHHNNLRSPSAMSNRSGGYISHINQNQAQPEIHVIKLHKS
TNGMGLSIVAAKGAGQDRLGIYIKSVVAGGAADADGRLTAGDQLLKVDGQSLVGITQEKA
AEYLVRTGPIVTLEVAKQGAIYHGLATLLSQPSPVMSRAYKTRPRSELLESAVETTEMTN
QPATSHSMGDLLSFPKQAPCQELVQPGPRRMSERDLPSRLGHDATLQQIHSSKSVPALHN
MGTEAKQQHEVFNPGYSRASSSNSVTPPVQPPPMATINSATSLRSRSSHNLHDPMRIGTL
PSTGLVSRQQSSPNLNPSTSHINTPSNVQGTEAERFYQNLSIYRNQDSTVKQQISPQQSE
DSRNPQHIQKGSLKGSQNSLNRPSTMEVGSHFRDRPTSAYITQGQQQSYSAVSNQMQQQT
NGPPRSQSSRDIIRQEAKMQEMQEEVRRRELRGGVPLLNQHRPPMYNISTRVAVPSAQQV
SNLRLPRPLGSTSNLGTTSNYMARQNAPSYNYLDAQYAQYNSTQYNQYNPNRYPVIESQY
GPMMMPKPKNETIARDHQPMPNENLLGRDSSSQEAKSYAEQNRHVAGSQNNPHYPNGNLE
PRVDQYENDNFNRAQNGDGHSTEVPPMRPALPSEDTFSESPPPPPPSTSTHPLYKQADTR
YTASMQDPPRGSYYPVGGISAMQQPRQYQYSATNPWQREEREKEQARRREAARQWRDQQI
AELSALTHRTQQQEEQLRALQLERDFQKRAEEIANQDDDEESNDLDNESVQRVQGLLRMA
ASQDRAIQGALPPTLSRTITGNQSMRSGLPLLSSQSVTSSHIHILPNQNTAPQNVEMSSP
GRENNGLHVQSNQQQQQQTAGQNEEHVSPANYGTHSHFSSGQKSYSMGMSHSVEDRELQR
KMDEVKRKQAGYEENQKKLEEQQQQIYQLNQHPRSQLHPGMLRLDNLIINGPNISTSSQN
NINDAPPPPERGSSYAVMSQQSALRSNGSTTSNLPPTSQQSASMKRVSFHDSNANSESML
RNVSSGMSNPPSISMDIIREDPNNFINDAENLLASPKTPEGSGTSFTGATPGVIGAQEVY
KDPRQKRLAEKQKQQQNSQIGAVPEKLSFKEKMKMFAMETGEDGTPRDKVKISRAQREID
NISSPLNSNNNNNNNNTTSGNNTNNNRT
NT seq
6387 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgtctgaagagatggcaacggaactagcgaataaaaaggcggagcgggacgct
ctcagggtagttatacagcagtggaacgccaatcgcttggacctgttcgaactttcggaa
cccaacgaagacttggagtttcacggcgtgatgagattttatttccaagacagcggtcaa
aaggtcgctactaagtgcatcagggttgcctcggacgcgactagccaggcagtgatagaa
acgcttatagaaaaatttcgtcccgacatgagaatgctgtccgtcccagaatatgccctt
tatgagattcatgagaatggagaggagcgtaagcttgatttagaagaaaaaccactacta
gttcaactaaattggcatatggacgatcgggagggacgcttcttgctgaagaggatcgac
gataaaaccaatgcgcaaggtgtcggttttacttcagccgaaggttctagctttcgaaga
aaattgagcaagcgagaaaaaaaacagattaagaagcaggagaagctcagtcgattaaag
agtttagagcaagatgagaatgcgatgcctggtgatcagaacggtgtcgccgagaagctt
tacacggaattacctgagaccagttttacgaggagcatctcgaatccggaagcggtgatg
agacgacgtcgccaacagaagcttgaaagaagacttcaacaatttcgtagtaaagacggc
ggtcctgacacaggcggtacattgaaaatttatggtgaggcgttgtgcaaagacgtgcca
tacaaaacactgctattgagtgtgcgagattccgccgctcaggttgtgcgagaaatgctt
tctaaatatggcctggaaaaagtggatccacaattatattgccttgtgcaggttaatagt
gagaacgtgagtggcaatatgcatcaggaatatatattggacgacgacgagtgtcctttg
gcgatattaatgaatcacccttccacgcgaggttccattatgtttcacgtgaggaggagg
cccgcagattacatgccgcggaaacgtaaaaagaaaccaactggaaaatggaacgagctg
gatcataaatacgaagacgagagactaccatttctgctggaacttaatcctgacggcagc
gatatcccgaatggcgccggagtgcgacaccgattacaaccgaatgtcacggaggtagga
tcagagagaccgataggaccgcaagcggtgcaagcgcaaacactgacgctgccgggaccg
atggtgatgcccaggcattgcgttatagcctttaccgagaacattgtgactctcacgcca
tgttccagagatgcgcatacatatgttaacaatcagaggatacatcagacgaccattcta
cagaatggtgctatcatcaaattcggcagaatgcacacctttcgattcattgacccggcg
ccggaagagcgcattaggcagagacacgattccaacaaacagatcgactatgcttatgac
cgacgctcgccggacgcgaccagtcaggatgtcagctcagagaagtttcatccggggtct
ggaacaccaaacggcggtagtcagatcccgggtcaagctcaagagcgagcgaccccgtca
agtccctcgaagtctgctgttgcagcagttcgtagtcctcgtagtcccacgcacccgccg
gagcccacgcacaattatgagaccacattcgacctggatggaaacgtggagaccgctagt
ctaagcagcagcagagatggcaacagcaggctctcacaatacgatcgacaaccgcgaggc
accgatccaattctgccagctgtcttagagtttctcgaggagacagaggagacattcctt
cacgctgtcatcaccgatatagaaccctcggcgccacaattcaagttagcgccaacatac
accctctatctcagcgccagatatcgcgccagtactcattatagaccagaattgcagcct
acggaaagagcgcatcgacttaccgtcatgttggcgaatgttgctactatgatacaacgc
gttatccaggaacgttacatggacgcttcgtcattggccttttggctagcgaatggctcg
gagttattacatatgttgaagagtgaccggcatgtaggtgcattttccacgcgagcgcaa
gatatcttggcagaagcggtacacacagcttttggttcgttggtgcgctgcattacatta
gagcttacaccagcaatgacacagttcatggcggacgcagatgaaccagcgaaggaggct
ggagtgttgcagattttttcaaatacgatggccttattacgacgatgccgtgtgaatgcc
gcattgacgatacaattatttagtcatctgtttcacgctatcaatgccacggctttcaat
actctcgtctcaaatggaaatctgtgcgtcagatggtttggacgcagactcaaagcgaga
ctgaacgcattagagacctgggccgaaaggcaaggcctggaacttgccagtcaatgccat
ttggcgacgatcatgcaggcgactcatctattacaagctccgaaatacaatgctgaggag
ctggctacgctaagctcgacctgctttaaattaaattctttacaagtgagggcattacta
caaaaatatcaaccggccgcggacgagcctagactacctgccgagttgatcgagaacgta
gtgagagtagcagagagtgtcgcggatacacttgcgcgtgcagatggtcgcgaaataaga
ttagaagaagaacctgtcctagggttagcattgctacttcccgaggatggctacagttgc
gaagtaataagaggtgttccaccgggattagcggaatttctgacacctctacaacgagac
ggattatgtcgaatggcagcccaacctagtagtagtggttattggactatttatatgata
gatcatcacaataatttgcgtagtcccagcgcaatgagtaatagatctggtggctacatc
agtcacataaatcaaaaccaagcacaacctgagatacatgttattaaattacacaagagt
accaacggtatgggcttaagcatcgttgcagcaaagggtgcaggacaggatcgattaggt
atctacatcaaaagtgttgttgctggtggtgccgcagatgctgacggtagattgacggca
ggtgatcaactactcaaggtagatggacaaagtctggtcgggataacgcaggaaaaagct
gctgagtatcttgtacgtaccggtccgatcgtgacattggaagttgcgaaacagggcgct
atatatcacggacttgcaacgttattatctcaaccttctccggtgatgtcaagagcatat
aagactcggcccaggtccgagctcttagagtcagcggtagagacaacggagatgaccaat
cagccagctacgtcacattcaatgggtgacttattgtcctttccgaagcaggcgccgtgt
caggagttagttcaaccaggtcctcgtcgcatgagcgagcgggatttaccgtcacggctt
ggacatgatgccactcttcagcaaatccatagcagcaagtctgtaccggcattgcataat
atgggtaccgaagctaagcaacagcatgaagtgttcaatcccggatacagcagagcttct
tccagcaatagcgttacaccgcctgttcaaccacctcctatggcgacgatcaatagtgca
acttctttacgttccaggtcgagccataacttgcatgatcccatgagaatcggaacttta
ccgtccactggcttggtcagcaggcagcaatcgtcgcccaatttaaatccaagtacgtcg
cacataaatacaccgtcgaatgtacagggcacagaagcagagcgattttatcagaatctg
agtatttatcgaaaccaagactcaacggtgaagcaacaaatcagtccacaacagtcagaa
gatagcagaaatcctcagcacatccaaaagggttcattaaagggttcgcagaactcattg
aatcgtccttctactatggaagttggcagccatttccgagatcgtccgacatctgcttac
attacccaaggccaacagcagagctactcagcagtcagcaatcaaatgcagcaacaaact
aatggtccaccacgttcccagtcttctcgtgacattatccgccaggaggcgaagatgcag
gagatgcaggaggaagttcgccgacgagaattgcgtggcggcgtaccgctactcaatcaa
catagaccgccaatgtacaacatcagtactcgagtagcggttccttctgctcaacaagtg
tcgaacttgcgtttaccaaggccactcggttccacgtcgaatctaggaacgacctccaac
tacatggcgagacaaaacgcgcctagttacaattatctggatgcccaatatgctcagtac
aacagcacgcagtataatcaatataatcccaaccgatatccggtaattgaaagtcaatac
ggtccgatgatgatgcccaaaccgaaaaacgagacaatcgcgcgcgaccatcagccgatg
cccaatgaaaatttactcggtagagactcgagcagtcaagaagcaaagtcatacgccgaa
cagaaccgacatgtcgcgggttcacagaataatccgcattatccgaatggtaatctagaa
ccccgcgtcgatcaatatgagaatgacaacttcaatcgtgcgcaaaacggagatggccat
tctacagaagtgccaccaatgagaccggctttgccatctgaggatacatttagcgaaagt
ccaccaccgccgccgcccagcacttcaacgcaccctctgtacaagcaagccgatacgaga
tataccgcaagcatgcaggatccaccacgaggtagttattaccctgtgggaggaatcagt
gccatgcagcaaccgcgtcagtatcaatatagcgcgacgaatccttggcaacgcgaagaa
agagagaaggaacaagctcgtagaagagaagccgctcgtcaatggcgagatcagcagatt
gctgagctaagcgcactaacacatcgaactcagcagcaggaggagcaactacgagctctt
caactggaaagagatttccagaagcgtgcggaggagattgctaatcaagacgatgatgag
gagagcaacgatttggacaacgagagtgtgcagcgcgttcagggcttgctaaggatggca
gccagtcaagacagagcaatccaaggagctctgccaccgactttatcgagaacaattact
ggcaaccaatctatgagaagtggtttgcctcttctgagcagccaatctgtcaccagcagt
catattcacattctgcccaatcaaaacacagcgcctcaaaatgttgaaatgagcagtcct
ggtcgagaaaataatgggttgcacgtacaatcaaatcagcagcaacaacaacaaacggcg
ggtcaaaatgaagagcatgtatcgccagctaattatggcacacatagtcatttcagttct
ggtcagaagtcttattccatgggtatgtcgcactccgtagaagatagggaattgcaacgg
aaaatggatgaagtgaagcggaagcaggctggatatgaagagaatcagaaaaaactagaa
gaacaacagcagcaaatatatcaattgaatcaacatccgcgcagccagctacaccctggc
atgttgcgcttagacaatttgattattaatggccctaacatatctacatcttcgcaaaac
aatataaacgatgcacccccaccaccagaacgaggttctagttacgccgttatgtcacag
cagagtgctctcagatcaaacggctcgactacatctaatctacctcccacttctcaacag
tcagcatctatgaaaagagtttcttttcatgattcgaatgcaaacagtgagtccatgctg
cgcaatgtatcatctggaatgtcaaacccgccgtcaatctcaatggatatcattagagaa
gatcccaacaattttatcaacgacgcagagaatttattagcctctcccaagacaccggaa
ggatccgggacttcgtttactggcgccactcctggtgtaatcggagctcaagaagtctat
aaggacccgagacaaaagcgactggcggaaaagcagaaacagcagcaaaactcgcagatt
ggcgcggtgccagaaaaactcagctttaaggagaaaatgaaaatgttcgcaatggaaact
ggcgaggatggcacaccgcgagataaagtgaagatctcgcgcgctcagcgtgagattgac
aacatcagcagcccacttaattccaacaataacaataataacaataacaccaccagcggc
aataacactaataacaataggacctaa
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integrated database retrieval system