Thomasclavelia spiroformis: NQ543_00175
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Entry
NQ543_00175 CDS
T09467
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
tsf
Thomasclavelia spiroformis
Pathway
tsf00521
Streptomycin biosynthesis
tsf00523
Polyketide sugar unit biosynthesis
tsf00525
Acarbose and validamycin biosynthesis
tsf00541
Biosynthesis of various nucleotide sugars
tsf01100
Metabolic pathways
tsf01110
Biosynthesis of secondary metabolites
tsf01250
Biosynthesis of nucleotide sugars
Module
tsf_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
tsf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NQ543_00175 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NQ543_00175 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
NQ543_00175 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NQ543_00175 (rfbB)
00525 Acarbose and validamycin biosynthesis
NQ543_00175 (rfbB)
Enzymes [BR:
tsf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
NQ543_00175 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
NAD_binding_10
NmrA
adh_short
Motif
Other DBs
NCBI-ProteinID:
UWO89693
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Position
36695..37720
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AA seq
341 aa
AA seq
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MKILVTGGAGFIGGNFVHYMVENHPEDMIVNLDLLTYAGNLETCKPVEGKPNYKFVKGDI
ADRKFIFDLFEKEKFDIVVNFAAESHVDRSITDPEIFVKTNVMGTTTLLDAAKEFGVKRY
HQVSTDEVYGDLPLDRPDLFFTETTPLHTSSPYSSSKASADLFVLAYHRTYGLPVTISRC
SNNYGPYHFPEKLIPLMISRALADEELPVYGKGDNVRDWLHVYDHCVAIDLIIRNGRVGE
VYNVGGHNERTNLEVVKTILKALNKPESLIKFVEDRKGHDRRYAIDPTKLETELGWKPKY
NFDTGIQQTIQWYLDNKEWWQNILSGEYQNYFEKMYAGKVK
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttagtaacaggtggagcaggttttattggaggaaactttgttcattatatg
gttgaaaatcatccagaagatatgattgtaaacttagatttattaacttatgctggtaat
ttagaaacttgtaaaccagttgaaggtaaaccaaattataaatttgtaaaaggtgatatt
gctgatcgtaagtttatctttgatttatttgaaaaagaaaaatttgatattgtagtaaac
tttgctgcagaatcacatgttgatagaagtatcacagatcctgaaatttttgttaaaaca
aatgtaatgggaactactactttattagatgcagctaaagaatttggggtaaaaagatat
catcaagtttctactgatgaagtatatggtgatttaccattagatcgcccagatttattc
tttacagaaacaacaccattgcatacttctagcccatatagttcttcaaaagcttctgca
gatttatttgtattagcttatcatagaacatatggcttgccagtaacaatttcaagatgt
tctaataactatggaccatatcatttcccagaaaaacttatcccattaatgatttctaga
gcattagctgacgaagaattaccagtatatggtaaaggtgataacgttcgtgattggtta
catgtatatgatcactgtgttgcaattgacttaattattagaaatggtcgagttggtgaa
gtttataatgtaggtggtcataatgaaagaacaaatctagaagttgttaaaactatttta
aaagctttaaataaacctgaatctttaattaaatttgttgaagatagaaaaggacatgat
agaagatatgctattgatccaactaagttagaaactgaacttggatggaaaccaaaatac
aatttcgatacaggtattcaacaaactattcaatggtatttagataataaagaatggtgg
caaaatatcttatctggtgaatatcaaaattattttgaaaaaatgtatgctggaaaagta
aaataa
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