Thomasclavelia spiroformis: NQ543_00940
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Entry
NQ543_00940 CDS
T09467
Name
(GenBank) discoidin domain-containing protein
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
tsf
Thomasclavelia spiroformis
Pathway
tsf00511
Other glycan degradation
tsf00520
Amino sugar and nucleotide sugar metabolism
tsf00600
Sphingolipid metabolism
tsf01100
Metabolic pathways
tsf04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tsf00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
NQ543_00940
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
NQ543_00940
00511 Other glycan degradation
NQ543_00940
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
NQ543_00940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
tsf03110
]
NQ543_00940
Enzymes [BR:
tsf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
NQ543_00940
Chaperones and folding catalysts [BR:
tsf03110
]
Intramolecular chaperones
Others
NQ543_00940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F5_F8_type_C
F5_F8_type_C_2
Glyco_hydro_20
Glyco_hydro_20b
FIVAR
DUF7402
Laminin_G_3
Muskelin_N
Talin_IBS2B
SDH5_plant
Motif
Other DBs
NCBI-ProteinID:
UWO89840
LinkDB
All DBs
Position
220092..224840
Genome browser
AA seq
1582 aa
AA seq
DB search
MKDVKIKVANALLVGGMVLSTVSPQLLGVQARNDAAALLDTEPGTTDLVNLAKGKTATAS
EEESGTEFKATKAVDGIVNRDAENKADQSRWGTSQLNGTEEAWLKVDLGETKTFQSFVIA
WERQNITEYQIQTSNTGDGDWETVYTKDGNGEISDVVETIHLDEAVTAQYVRLLVTGYNG
KYVDGNPDADWKSVSVYEFQVYENDIPDDLLPDENYNREGKATASNSESGTSFTPDKAID
GNTKDKASRWATDTNSSNLARTLTIELPVSQRVRSFKIFWERANIEQYTISVSNDGTSYE
DVYTSSEAVSETEEVITLDKAVWAKYVKLNVTKYNGGNNNWPNVSLYEFEAYANVPKVES
PDIEPDDTAKEAAAKLKTAPTFNEDQTALVLPEVPEGFKVEFLADLEQIVAKDGKIYQPL
TDTAIKGIYKITKGEETAESTTELALTIPGIHETAGENTKPTVIPELAEWHGESGDFKVK
ASTRLVIDASAKDIATKAAQAFQADYKEASGKELEIVTDETAKPGDIFFTKDTTNNLGKE
GYIMDIDDIVTIKAEQSTGAYWSTRSMLQILKLEDDTMPKGLTRDYPKYSVRSFSLDVAR
KPVSMETLNSIAKEMAYYKMNDFQVHLNDNLIFYEDYGSVETAMEKAYTGFRLESDIKKG
QVIEGDSKGVANAADLTSTDLSYSKKEFREFILDSREMGVNIVPEFDAPGHSGAFMDVRP
DLHLKKTVEGNAARAGEQFDLSDEHYADSSNFVKKLWDEYLTEDMFDSSMVVHVGTDEYY
GDAEAFRKFSDDIIEHVQETNPTVRMWGSLSHKNGSTPVRSKNVQMNCWYNPYAQPKDMY
EQGYQLINTVDGDLYMVPAAGYYGDYLNTQRLFNNWQVNSIGGVEISAASEQMLGSTFAI
WNDSIDTRANGISEVDIYDRFIQAVPTLASKNWGDAKETTYAELTETVEQLGDAPGHNPY
HKASAKDGKYMEYKFEANDTKGDASENNRDLLTDVNAKFEKGALTLSGDESYVTTPIEKL
ATGNTLEFDITLNQEAKPGEILFEADAPGNERYVHDIRILDDGTLGYKRELYDFSFGYKL
PVGQKVHLAISTDGIRTYLFVNGEKYNAVGKYVDETGEVKQENIKPGLSLGNNNGGYGVG
TLLLPIQRIGSTSNAIDATIDNVVVSEGVQKDTTILDGKTFTVTTNNEQSDMGTEGPISY
AFDGNLSTIWHTSYSPYKNLPAEVIVDMNKTYDINKLTYIPRSSGTNGNITKYSLYYQVE
NSDEWVPIIEEGTWDGNGEEKIIKFDQVTARKLKFIALDGVTNNPGKPFAAAAEFYVHQV
VSDQPDVEADKELLSIAIAAAKEITQEHLDTVIPVVAKEFKEALANAEAVYADDKATQEE
VNNVFDRLANAMHMLDFIKGDKASLKTFIDKVSGLESSKYTEDTWTPFNDALTAATNVYN
DENAMQEEINTVYTELVKAFVNLRLIPNKDLLEDLINQANGLNVANYTKASFDGLTKALN
EAKAVFDDPNATQEQVNSAKDVLAKAMAGLQTVTTDNTVSTPVSNGDTTVSVKTGDDALV
GTLAGLALLSIAGAKVLRKKED
NT seq
4749 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacgtaaaaattaaagtagccaatgccttactagttggaggaatggtattaagt
actgtttcaccacaactattaggggttcaggctcgaaatgatgcagctgcgttacttgat
actgaaccgggaacaactgatttagttaaccttgctaagggtaaaacagcaactgctagt
gaagaagagtcgggaacagaatttaaagctactaaagcggttgatggaattgtcaatcgt
gatgcagaaaataaagcagatcaatctcgttggggaactagtcaacttaatgggactgaa
gaagcttggttgaaagttgatttaggtgaaactaaaactttccaatcatttgtaattgca
tgggaaagacaaaatattaccgaatatcaaattcaaacatcaaatactggtgatggtgat
tgggaaacagtttacactaaagatggtaatggagaaatttctgatgtagtagaaacaatc
catttagatgaagctgtaactgctcaatatgtacgtttactagttactggatacaatggt
aaatatgttgacggcaatccagatgctgattggaaatcagtttcagtatatgaattccaa
gtatatgaaaatgatattccagatgatttattgccagatgaaaactacaatcgtgaagga
aaagcaacagctagtaattctgaaagtggaacatcatttacaccagataaagctattgat
ggaaatactaaagataaagcttcacgttgggcaactgatactaattctagtaatttagct
cgaacattgacaattgagttaccagtaagtcaacgagtaaggtctttcaagattttttgg
gaaagagcaaatattgaacaatatacgatttcagtatctaatgatggcacaagttatgaa
gatgtctatacaagtagtgaagctgtaagtgaaactgaagaagttattactttagataaa
gctgtatgggcaaaatatgttaagttaaatgttactaaatataatggtggtaacaataat
tggccaaatgtttcattgtatgaatttgaagcatatgcaaatgtgccaaaagttgaaagt
ccagatattgaacctgatgatacagcaaaagaagctgctgctaagttaaaaacagcacct
acttttaatgaagatcaaacagctttagttttaccagaagttccagaaggatttaaggtt
gaatttttagctgatttagaacaaatcgttgcaaaagatggtaagatttatcaaccatta
acagatacagcaataaaaggaatttataaaattacaaaaggtgaagaaactgctgaatct
acaacagaattagcgcttacaattccaggtattcatgaaacagctggagaaaatacaaaa
ccaactgtaattcctgaactagctgaatggcatggagaatctggtgactttaaagtaaaa
gcaagtacacgtttagtaattgatgctagtgctaaagatattgctactaaagccgcacaa
gctttccaagctgattataaagaagctagcggtaaagaattagagattgtaactgatgaa
acagctaaaccaggagatatcttctttacaaaagatactactaataatttaggtaaagaa
ggatatatcatggatatcgatgatatcgtaacaattaaggcagagcaatcaactggggcg
tattggtcaactagatcgatgttacaaattttaaaactagaagatgatacaatgccaaaa
ggtttaactcgtgattatcctaaatattcagtacgtagtttcagtttggatgtagctcgt
aaaccagtttcaatggaaacattaaattctatcgctaaagaaatggcatattataaaatg
aatgatttccaagtgcatttaaatgacaatttaattttctatgaagattatggttcagtt
gaaactgcgatggaaaaagcatatacaggattccgtctagaatctgatattaaaaaagga
caagtaattgaaggcgattctaaaggtgttgctaatgctgctgatttgacttcaacagac
ttatcttattctaagaaagaatttagagaatttattttagacagtcgagaaatgggtgtt
aatattgttcctgaatttgatgctccaggacattctggtgctttcatggatgttcgtcca
gatttacatttaaagaaaacagttgaaggaaatgctgcaagagcaggggaacaatttgac
ttatctgatgaacattatgctgatagttctaactttgttaaaaagttatgggatgaatat
ttgacagaagatatgtttgattcaagcatggtagttcatgttggtactgatgaatactat
ggtgatgcagaagcattccgtaagttctctgatgatattattgaacatgttcaagaaact
aatccaactgtacgtatgtggggaagtttatcacataaaaatggaagtacaccagttcgt
agtaaaaatgtacaaatgaattgctggtataatccgtatgcacagcctaaagatatgtat
gaacaaggatatcaattaattaatacagttgatggtgatttatacatggtacctgctgca
ggatattatggagattacttaaatacacaaagattatttaataattggcaagttaatagt
attggtggtgtagaaatttctgcagcatctgaacaaatgttaggaagtacatttgcgatt
tggaacgatagtattgatactcgtgctaatggtattagcgaagtagatatttatgatcgt
tttattcaagcagtgccaactcttgcttctaaaaactggggtgacgctaaagaaacaact
tatgctgaattaactgaaacagttgaacaattaggtgatgcaccaggtcataatccatat
cataaagcatctgctaaagatggaaaatatatggaatataaatttgaagctaatgacact
aaaggtgatgcatcagaaaataatcgtgatttattaacagatgttaatgctaaatttgaa
aaaggtgctttaacattaagcggtgatgaaagctatgtgacaacaccaattgaaaaatta
gcaacaggaaatacattagaatttgatattacattaaatcaagaagcaaaaccaggagaa
attttatttgaagcagatgcaccaggtaatgaacgttatgtgcatgatattcgcatcttg
gatgatggtactttaggatataaacgtgaattatatgatttctcatttggatataaatta
ccagttggccaaaaagttcatttagctattagtactgatggtattcgtacttacttattt
gttaacggtgaaaaatataatgctgttggtaaatatgtggatgaaactggtgaagtaaaa
caagaaaatattaaaccaggtttaagtctaggaaataataatggtggttatggtgttgga
acattattattaccaattcaaagaatcggttcaacaagcaatgcaatcgatgcaacaatc
gataatgtagttgttagtgaaggagttcaaaaagatactacaatacttgatggtaaaact
ttcactgtaactacaaataatgaacaatcagatatgggtacagaaggacctattagttat
gcatttgatggtaatttatcaacaatttggcatacatcttatagcccatacaaaaactta
ccagcagaagttattgttgatatgaataaaacatatgatatcaataaattaacatatata
cctcgttcaagtggaacaaatggtaacattactaaatattcattatattatcaagtagaa
aatagtgatgaatgggttccaattattgaagaaggaacttgggatggtaatggtgaagaa
aagataattaaatttgaccaggtaacagctagaaaattaaaatttattgcacttgatggt
gtaacaaataatccaggtaaaccatttgctgctgctgctgaattctatgttcatcaagta
gtatctgatcaaccagatgttgaagcagataaagaattgttatcaattgcaattgcagct
gcaaaagaaataactcaagagcatttagatactgtgattcctgtagtagcaaaagaattt
aaagaagcgcttgctaatgctgaagcagtttatgctgatgataaagcaacacaagaagaa
gttaacaatgtatttgatagattggctaatgcaatgcatatgttagactttattaaaggt
gataaagcgtcattaaaaacatttattgataaagtaagtggtttagaaagtagcaagtat
acagaagatacatggacaccatttaatgatgcattaacagcagcaactaacgtatataac
gatgaaaatgcaatgcaagaagaaataaatacagtatatactgagttagtaaaagcattt
gtaaacttaagattaatccctaataaagacttattagaagatttaatcaatcaagcaaat
ggattaaacgtagcaaactatacaaaagcatcatttgatggattaacaaaagcattaaat
gaagcaaaagcggtatttgatgatccaaatgcaactcaagaacaagtaaatagtgcaaaa
gatgttttagccaaagcaatggctggattacaaacagtaacaactgataacacagtaagt
acacctgtaagtaatggcgatacaacagtaagtgtaaaaacaggtgatgatgcactagta
ggaacattagcaggactagcattattaagtattgcaggagctaaagttcttagaaaaaaa
gaagattaa
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