Thomasclavelia spiroformis: NQ543_02515
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Entry
NQ543_02515 CDS
T09467
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tsf
Thomasclavelia spiroformis
Pathway
tsf03030
DNA replication
tsf03410
Base excision repair
tsf03420
Nucleotide excision repair
tsf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NQ543_02515 (polA)
03410 Base excision repair
NQ543_02515 (polA)
03420 Nucleotide excision repair
NQ543_02515 (polA)
03440 Homologous recombination
NQ543_02515 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsf03032
]
NQ543_02515 (polA)
03400 DNA repair and recombination proteins [BR:
tsf03400
]
NQ543_02515 (polA)
Enzymes [BR:
tsf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NQ543_02515 (polA)
DNA replication proteins [BR:
tsf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NQ543_02515 (polA)
DNA repair and recombination proteins [BR:
tsf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NQ543_02515 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NQ543_02515 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_2
HHH_5
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
UWO90144
LinkDB
All DBs
Position
577109..579721
Genome browser
AA seq
870 aa
AA seq
DB search
MKELVLIDGNSLLYRAYYATAAMGNLMVNKDGIPTNAVYGFANMLENILKGNPEYIVVAF
DYGKKTFRNDLFEVYKGTRSATPDELVCQFSMIREYLTAHGIHYQEIEGYEGDDVIGTIA
SIASKKRFKVSIVTSDKDMLQLVDDNVSVYLTKKGVAELEKITPEKFKEMYGLIPDQMRD
LKGLMGDKADNIPGIPGVGEKTALKLLKQYHTIENLNDHLDELKGKMGEKIRDNIDQGLL
SKKIATIIKDVPMELDLDDFYYQGFDYNELAEFYRRYNMNSLLKRMSLANEDNKGETVID
VKIVDCLPIIKRDSSIVVGVFDSNYHRSLIVGFAIYNNSEAYYIDIENAIKCQNFQNFIN
DESIEKYGYDIKKCINAAKWHGLEIKNYVFDLQLASYILNPSLKDEIRSVCEYYDYYDVL
YDEEVYGKGAKKKIPETTAIADHLIKQAKAIYVLKDKAIEKLKQENQFDLYKDVEMPVAK
ILASMEYQGAKIDKDVLKDLENQFGKEIEVLEKEIHQLANKNFNIASPKQLGEVLFEDLG
LPNGKKTKTGYSTSVDILNKLKDVHPIINKVLQYRTLSKLYSTYIIGLQEQIFVDGKIHT
IYNQALTQTGRLSSTDPNLQNIPVKTAEGKLIRKAFIPEYDYLVSFDYSQIELRVLAHLA
NVKSLIKAFNEDKDIHRHTASEIFGVDEDEVDSTMRRNAKAVNFGIIYGMSDFGLAEQVG
VPVNEARNFIKRYFENYPEIKTYMDNNIEFCKKNGYVTTMLNRKRFIREINEKNYMRQEL
GKRLAMNSPIQGSAADIIKVAMIKVDELFKKHNLKSKMILQVHDELIFDVYKEELEEVME
VVAKGMTTAVKMNVELKSEGSYAINWYELK
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattagtattaatagatggaaattcattgttgtatcgcgcatattatgcaaca
gcagcgatgggaaatttgatggttaataaagacggtataccgacaaatgcagtttatgga
tttgctaatatgttagaaaatattttaaagggcaatcctgaatacatcgttgtagctttt
gattacggtaaaaaaacatttagaaatgatttatttgaagtatataagggaacacgtagt
gctacccctgatgaattggtttgtcaattttcaatgattagagaatatttaacagcacat
gggattcactatcaagaaattgaggggtatgaaggtgatgatgttattggaacgattgct
agcattgcaagtaaaaaaagatttaaagttagtattgttaccagtgataaagatatgttg
caattagttgatgataatgtcagtgtttatttaacaaaaaaaggtgttgctgaactagaa
aaaataacaccagaaaagtttaaagagatgtatggattaattcctgatcagatgagagat
ttaaaaggattaatgggggataaggctgataatattcctggaattcctggagttggtgaa
aaaacagctttaaaattattaaagcaatatcatactattgaaaatttaaatgatcattta
gatgaattaaaaggaaaaatgggtgaaaagattcgtgataatattgatcaaggattactt
tcaaaaaaaattgctacaataattaaagatgttccaatggaacttgatttagatgatttt
tattatcaaggatttgattacaatgaacttgctgagttttatcgccgttataatatgaat
tcattattaaaaagaatgtctttagctaatgaagataataaaggagaaacagttatagat
gttaaaatagttgattgtttgccaattatcaaacgagacagttcaattgttgtaggtgtt
tttgatagtaactatcatcgttcattaattgttggctttgcaatttataataatagtgaa
gcttattatattgatattgaaaatgcgataaaatgtcaaaatttccaaaattttatcaat
gatgaatcaatagaaaaatatggatatgatattaaaaaatgtattaatgcagctaaatgg
catggtttagaaataaagaactatgtttttgatttacaattagcatcttatatattaaat
cctagtttaaaagatgaaattcgcagtgtatgtgaatattatgattattatgatgtttta
tatgatgaagaagtttatggtaaaggtgcaaagaaaaaaattccagaaacaacagcaatt
gctgatcatttaattaaacaggcaaaagctatatatgttttaaaagataaagcgattgaa
aaattaaaacaagaaaatcaatttgatctatataaagatgtagaaatgccggttgctaag
attttagcaagtatggaatatcaaggtgctaaaattgataaagatgttttaaaagattta
gaaaatcagtttggtaaagaaattgaggttttagaaaaagaaattcatcaattagctaat
aaaaattttaatattgcttctccaaaacaattaggtgaagttctatttgaagatttaggt
ttacctaacggaaaaaagactaaaacaggatattcaacatctgttgatattttaaataaa
ttaaaagacgttcatccaatcataaataaagtattacaatatcgaacactttctaaatta
tattctacatatattatcggcttacaagaacaaatatttgttgatggaaaaattcacaca
atatataatcaggcattaacccaaaccgggagactttcatctactgatcctaatcttcaa
aatattccagtaaaaacagctgaaggtaaattaatccgcaaagcatttattccagaatac
gattatttagtttcatttgattattcacaaattgaattaagagtattggcacatttggca
aacgtaaaatcattaattaaagcatttaatgaagataaagatattcatcgtcatacagct
agtgagatttttggagtagatgaagatgaagttgatagtacaatgcgtcgtaatgctaaa
gcggtaaattttggaattatttatggaatgtcagattttggtttagcggaacaagttggg
gtaccagttaatgaagcacgtaattttataaaacgttattttgaaaattatccggaaatt
aaaacatatatggataacaatattgaattttgtaaaaagaatggttatgtaacaacaatg
ttaaatcgtaaacgttttattcgtgaaataaatgaaaaaaattatatgcgtcaagaactt
ggtaaacgtcttgcgatgaattcaccaattcaaggatcggctgctgatattattaaagtg
gcaatgattaaagttgatgaactgtttaaaaagcataatttaaaatctaaaatgatttta
caagtgcatgatgaattgatttttgatgtttataaagaagaattagaagaagtaatggaa
gttgttgccaagggaatgacaacggctgttaagatgaatgtagaattaaaatctgaagga
agttatgctataaattggtatgaattaaagtag
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