Thomasclavelia spiroformis: NQ543_02520
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Entry
NQ543_02520 CDS
T09467
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
tsf
Thomasclavelia spiroformis
Pathway
tsf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tsf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NQ543_02520 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsf03400
]
NQ543_02520 (mutM)
Enzymes [BR:
tsf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NQ543_02520 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NQ543_02520 (mutM)
DNA repair and recombination proteins [BR:
tsf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NQ543_02520 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
Zn_ribbon_IS1595
C1_2
Motif
Other DBs
NCBI-ProteinID:
UWO90145
LinkDB
All DBs
Position
579730..580542
Genome browser
AA seq
270 aa
AA seq
DB search
MPELPEVETVRRTLKNFVLNKRIISIDIMYPKIIEDDIEEFKNKVCNQVINDIDRIGKFL
IFKLDDVAFVSHLRMEGKYHYVNRDEPLNKHDHIVFNLDDGKQLRYNDTRKFGRMKLVSL
DNYANELPLSKLGPEPFYADEKKLYEKLHKCNLPIKHALLDQSIIAGIGNIYANEICFAM
GLDPYTPASKLTKKSVKELIEVASSILNEAIKQGGTTIHSFSANGIDGLFQVKLKVHLQK
KCSICGGEITKEAIKGRGTYYCKKCQKRRR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgccagagttaccagaagtagaaacggttagaagaactttaaagaattttgtattaaat
aaaaggattatttcaattgatatcatgtatcctaagattattgaagatgatatagaggaa
tttaagaataaagtttgtaatcaagtaatcaatgatattgatcgaattggtaaattttta
atttttaaattagatgatgttgcttttgtttctcatttgagaatggaaggcaaatatcat
tatgtaaatcgtgatgaaccgttaaataaacacgatcatattgtttttaatcttgatgat
ggtaaacaacttagatataacgatacccgtaagtttggaagaatgaagttagttagtttg
gataattacgctaatgaattgccattatccaaattaggaccagaaccattttatgctgat
gaaaaaaaactatatgaaaaattacataaatgcaatttaccgataaagcatgctctttta
gatcaaagtattatcgcaggaattggtaatatttatgctaatgaaatatgttttgcaatg
ggtttagatccatatactcctgcaagtaaattaactaaaaagagtgtaaaagagttaatt
gaagtagcaagtagtattttaaatgaagcaattaaacaaggtggtactactattcattca
tttagtgcaaatggaatagatggcttgtttcaagttaaattaaaagtccatttacaaaaa
aaatgttctatttgtggtggtgaaattactaaagaagcaattaaaggacgtggaacatat
tattgtaaaaaatgtcaaaagaggagaagataa
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