Thomasclavelia spiroformis: NQ543_03625
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Entry
NQ543_03625 CDS
T09467
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
tsf
Thomasclavelia spiroformis
Pathway
tsf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NQ543_03625 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsf03400
]
NQ543_03625 (recO)
DNA repair and recombination proteins [BR:
tsf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NQ543_03625 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NQ543_03625 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
zf-C4_ClpX
Motif
Other DBs
NCBI-ProteinID:
UWO90349
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Position
804883..805629
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AA seq
248 aa
AA seq
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MTINNEESIEGLVLKNKPYKESDMLVWIYTKTYGKMALIARGVKKMKSKNAPACQTISLG
EYLFIPRKGLSTLIKGSVIDYFVHIKEDIELEAYASYFIEYVYKYILDNDPDEECYNNLL
LALKYLNSGYDPRLVYLLFNAYILKATGCALEVEQCSVCGDSSHIAGISISSGGFVCKEC
LGMYDMRLSIEVLKGFRYINKCSLENIDLLKLDDDVIDQLTEIMNAYIDEFTGLVFQSRK
FILQLSNF
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgactattaataatgaagaaagtatcgaagggcttgttttaaaaaacaagccctataaa
gaaagtgatatgttagtatggatatatactaaaacttatggcaaaatggctttaattgct
cgtggtgtaaagaagatgaaaagtaaaaacgctccagcttgtcaaacaatttctttaggt
gaatatttatttatacctagaaaggggttatcaacattaataaaaggatcagtaattgat
tattttgttcatattaaagaagatattgaattagaagcatatgctagttattttattgaa
tatgtttataaatatattttagataatgatcctgatgaagagtgctataataatttactt
ttagcacttaaatatttaaatagcggttatgatcctagattagtttatctattatttaat
gcttatattttaaaggcaactggttgtgctttagaagtggagcaatgtagtgtatgtgga
gacagtagtcatatagcgggaatctcgattagtagtggtggttttgtttgtaaagaatgt
ttggggatgtatgatatgcgtttatcaattgaggtattaaagggatttcgttatattaat
aaatgttcattagaaaatattgatttacttaagcttgatgatgatgtgattgatcaattg
actgaaattatgaatgcttatattgatgaatttacagggttagtatttcaaagtcgtaag
tttattttacagttaagtaatttttaa
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