Thomasclavelia spiroformis: NQ543_03680
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Entry
NQ543_03680 CDS
T09467
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
tsf
Thomasclavelia spiroformis
Brite
KEGG Orthology (KO) [BR:
tsf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsf03019
]
NQ543_03680
03009 Ribosome biogenesis [BR:
tsf03009
]
NQ543_03680
Enzymes [BR:
tsf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NQ543_03680
Messenger RNA biogenesis [BR:
tsf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NQ543_03680
Ribosome biogenesis [BR:
tsf03009
]
Prokaryotic type
rRNA helicases
NQ543_03680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Mago-bind
Motif
Other DBs
NCBI-ProteinID:
UWO90359
LinkDB
All DBs
Position
819309..820679
Genome browser
AA seq
456 aa
AA seq
DB search
MNTFEKYNFQKFCYQTINELGFSKPTSIQEKVIPLVYKNNDIIGISQTGTGKTHAFLLPV
MDQIDTNQDCVQAVITAPTRELATQIYNNAKLFVKYNEKIRVSLLIGGSDRQKSVNKLTV
QPHIVIGTPGRIKDLALDEQALKITTASTFIIDEADMTLEFGYLEDIDAVAGKMKEDLKM
MVFSATIPQMLRPFLKKYMQTPVIVEIDDDKVTTDNVEHVLIATKHQDRYDVLKKIMNII
DPYICIIFANKRDEVAKITKQLREDGFKVGEVHGNLEPRERKQMMRRIHNNEYQYIVATD
IAARGIDIDGVSHVINLEFPKESDFYIHRSGRSGRGKYTGVCYSMYDTSDEANLKVLEKK
GIIFKNMAIKNNQFVDLGERLKRTKRVKQQTELEKKVQSIIRKPRKVKPGYKKKRKREIE
TVVRKQKRQMIQNDIRRQKKERARAAQIAKRNMEDN
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaatacatttgaaaaatataactttcaaaagttttgttatcaaacaatcaatgaatta
ggttttagtaaacctacatctattcaagaaaaagtcattcccttagtatataaaaataat
gatataattggtatttcacaaactggaacaggtaaaacacatgcatttttattaccagta
atggatcaaatagatactaaccaagattgtgttcaagctgtaatcactgctcctacaaga
gaattagcaacgcaaatatataataatgcaaaattatttgtaaaatataatgaaaaaatt
agagtatctttattaattggtggaagtgatcgccaaaaatcagtaaataaattaacagtt
caaccacatattgttattggaacaccaggaagaataaaagatttagcattagatgaacaa
gcattaaaaataactactgcttctacatttattattgatgaagctgatatgacattggag
tttggttatttagaagatattgatgcagttgctgggaagatgaaagaggatttaaaaatg
atggttttttcagcaacaattcctcaaatgttaagaccctttttaaaaaaatatatgcaa
acacctgtaattgtagaaattgatgatgataaagtaacaactgataatgtagaacatgtt
ttaattgctacaaaacatcaagatcgttatgatgtattgaaaaaaataatgaatataatt
gatccttatatttgtattatttttgcaaataaacgcgatgaagttgctaaaattactaaa
caattacgtgaagatggatttaaggttggtgaagttcatgggaatttagaaccacgtgaa
cgtaaacaaatgatgcgaagaattcataataatgaatatcaatatatagtagccacagat
attgctgctaggggaattgatattgatggagtttctcatgttatcaatcttgaatttcca
aaggaatcggatttttatattcatcgcagtggacgaagtgggcgtggtaaatatactggt
gtttgttatagtatgtatgatactagtgatgaggcaaatttaaaggtattagaaaaaaaa
gggattatctttaaaaatatggcaattaaaaataatcaatttgttgatttaggtgaacgt
ttaaaaagaactaaacgtgttaaacaacaaactgaattagaaaaaaaggttcaaagtatt
atccgtaagccaagaaaagtaaaacctggatataagaaaaaacgtaaaagagaaattgaa
acagttgttcgtaagcaaaaacgtcaaatgattcaaaatgatataagacgtcagaaaaaa
gaacgtgctagagcagcacaaattgcaaaaagaaatatggaggataattaa
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