Thomasclavelia spiroformis: NQ543_04190
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Entry
NQ543_04190 CDS
T09467
Name
(GenBank) discoidin domain-containing protein
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
tsf
Thomasclavelia spiroformis
Pathway
tsf00511
Other glycan degradation
tsf00520
Amino sugar and nucleotide sugar metabolism
tsf00600
Sphingolipid metabolism
tsf01100
Metabolic pathways
tsf04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tsf00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
NQ543_04190
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
NQ543_04190
00511 Other glycan degradation
NQ543_04190
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
NQ543_04190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
tsf03110
]
NQ543_04190
Enzymes [BR:
tsf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
NQ543_04190
Chaperones and folding catalysts [BR:
tsf03110
]
Intramolecular chaperones
Others
NQ543_04190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F5_F8_type_C
F5_F8_type_C_2
Glyco_hydro_20
FIVAR
Glyco_hydro_20b
Laminin_G_3
DUF7402
3keto-disac_hyd
DUF3450
Gram_pos_anchor
FAD_SOX
Motif
Other DBs
NCBI-ProteinID:
UWO90455
LinkDB
All DBs
Position
924151..929694
Genome browser
AA seq
1847 aa
AA seq
DB search
MKGKERIAKRAFKVLVAATMVVTSTQFGSFAVQAEVERQNFALNQEASANYEDSAHGFDA
EKAFDGNDELSSRWAAKEGERTGWLSVDLGRERTFDEFRILAEKDAQKIGKFTIEGSHDG
NVYETIFQSEDKTNDGGYDVDYTVKLNAPVTYRYVKITVESLVAGAYPSLSLREFEVLGD
KVAETPMNENLALNKAVTASAEYGSMPASNLTDADKDSRWSTEKNATQWAYVDLGQTYEM
NTFAMIWESASVYASDYNIYVSNDPNNWGEAVVSRNGNTSASSTEFLQAPVSGRYVKLEV
TKQYGYPSVSCRDFEVMLTDGQQLPQDPQENVALNKDATSSSNETSGLNASKAFDGDHTT
RDSRWASALGNGPHWISVDLGEVRNIKTVRLFWETRKATDYEIQVSSTGEEDSWQTVKHI
ESRPAIKTDRIVLDEVVRAQYVRLMVNDFTAQDPDGGVEWNNISLYEMEVYGGIIEDSAS
DIANQITIEEPQKGDTELVVNYPETDKYLVEYNGTDFEQVVDENLHIYQPIVDKVVKVSF
KITDKETNEYEFKEIGITIPGKYQQEETDNPAPVILPELAEWKGFEGNFTVLPTSRIVYS
NADLKAAAEAMAEDYELLTGKAISVVQGDQPQAGDFYFVQTTDTSKGLMEEGYIMEVDDV
ITVTSETKTGAYWATRTILQALKQSDYTTIAKGETRDYPLYEVRGFIMDVARKTFTLDYL
KQLVKEMSWYKMNDFQVHLNDNLIPLEYYSQNGMDPMDAYSAFRLESDIKKGGNNGLNQA
DLTSTDLFYTKDEFREFIKDSRELGVNIVPEIDTPAHSLALTKVRPDLRNGTYGRENDHL
NLVSKYNESLEFVQSIFSEYMTEENPVFDSQTTVHIGADEYNASSQAYRKFVNDMLDFVE
GTGRKARVWGSFTQASQGEDIDAEGVEINLWNFGYANMDQMYEDGFDLINCNDGNYYIVP
NAGYYYDYLSDSTMYNLDINTISGVTIPAGDDQMKGGAFAVWNDMTDYLDNGVSEYDVYD
RIERGLPLFAAKLWGKGDMNLEEAKATSDSLGDAPGTNFGYEVESKEDAILNMPMDEYED
TSANDHQIEQGVNAQIETVDFKNALRLNGGQSYISTDLETVGLGNDLRVKVKRTSDSTEE
QILFESPYGNIKAVQKDTGKVGFSRERFDFSFNYTLPVNEWVELEFKNQQNRISLYVNGE
LVDTLGDDERIEGRPMLATTMFPIQTIGSKTNAFIGYVDDLRLGKNDTFASTMALDYAIW
NGEAVLTNMANEQLRTVIDEAKSVLTEYAPSKATVDSYVSQINDLLSQMDYKKADYSRLN
AYLALTKDLSEFTDESVASVNQVIEGIRLNLPVQLQSTVDAYEKALVQALDNLELKDKTD
PNLVDSSKLTATASSYQQDGSNPSNVLDGSTSTMWHSAWNITTMPHYIDLEIDESTEIKG
LIYTPRQSGSNGNLLEYQIQVSDNGVDYETIATGTLENNAQAKTINFAPVTTKHVRLVYV
RAVNNNASASEISLIQAKVNPDIEGLQAIIDNAKSMSNVGYTDETWTAFQDVIKEAEALV
NLENPGANEVEAMKQTIASSIVALRLSEEELVVADKTALQIAVDLADKVTDKDLENVVPV
VAEEFKAALQEAKEILADETASQEDVNASFDRLASVMQKLEFYKGDKTALKAFIDDVSNL
DSTKYSTDTWAAFEKELNEAIAVYEDLNAMQEEVNNAHKELVTAFLNLRLIPDKSLLEEL
INKAEGLNSTNYTKATFDGLKDALNEAKAVFNDPNATQEQVNNAKDVLEKAINSLEVITT
VDNTPSTPVDNGDTTSVKTGDTTNLWYSLATLTLASVALYGSKKRKK
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaggaaaggaaagaatagctaagcgtgcatttaaggttttagttgctgctacaatg
gtagttactagcacacagtttggaagttttgcagtacaagccgaagtagaaagacaaaat
tttgctttgaatcaagaggctagtgctaactatgaagattcagctcatggctttgacgct
gaaaaagcattcgacgggaatgatgaactttcatcacgctgggcagctaaagaaggggaa
cgtactggttggttgagtgttgatctaggtagagaacgtacatttgatgaatttagaatc
ttagctgaaaaagatgctcaaaaaattggaaagttcacaattgaaggttctcatgatgga
aacgtttatgaaacaattttccaatcagaagacaaaacaaatgatggagggtatgatgtt
gattatactgtaaaactaaatgctccagtaacttatcgttatgttaagattactgttgaa
tcattagttgcaggtgcatatcctagtttatctttacgtgaatttgaagttttaggggat
aaagtcgctgaaactccaatgaatgaaaatttagctttaaataaagctgttacagcaagc
gctgaatatggatcaatgccagcatctaatttaacagatgccgacaaagatagtcgttgg
tcaacagaaaaaaatgcaactcaatgggcgtatgttgatttaggacaaacatatgaaatg
aacacatttgctatgatttgggaaagtgcaagcgtatatgcaagtgattataatatttat
gtttctaatgatccaaataattggggagaagctgttgttagtcgaaatgggaatacatca
gctagtagtactgaatttttacaagcgcctgtttcgggtcgttatgttaaattagaagtg
acaaaacaatatggttatccaagtgtatcttgtcgtgattttgaagtaatgttaactgat
ggtcaacaattaccacaagatcctcaagaaaatgttgcattaaataaagatgctacatca
agttcaaatgaaacaagtggtctaaatgcttcaaaagcatttgatggtgatcatacaact
agagattcaagatgggcaagtgccttaggaaacggaccacattggatcagtgttgattta
ggtgaagtaagaaatataaaaacagttcgtttattctgggaaactagaaaagcaacagat
tatgaaatccaagtatctagcactggtgaagaagattcatggcaaacagttaaacatatt
gaatcacgtcctgcaattaaaactgatcgtattgttttagatgaagttgtacgtgcgcaa
tatgtacgtttaatggttaatgattttactgcacaagatccagatggaggagtagaatgg
aataatatttcactgtatgaaatggaagtatacggaggaataattgaagatagtgctagt
gatatcgctaaccaaattacaattgaagaacctcaaaaaggcgatactgagttagttgta
aactatccagaaactgataaatatcttgttgaatacaatggtactgattttgaacaagtg
gttgatgaaaatttacatatttatcaaccaattgtagataaagttgtaaaagtatcattt
aaaatcacagataaagaaacaaatgaatatgaattcaaagaaattggtattacaattcct
ggtaaatatcaacaagaagaaactgataatcctgcaccagtaattctacctgaattagct
gaatggaaaggatttgaaggtaatttcacagttcttcctacatcaagaattgtatatagt
aatgctgatttaaaagctgcagcagaagctatggctgaagattatgaattacttactgga
aaagcaatcagtgttgttcaaggtgatcaacctcaagctggagacttctacttcgtccaa
actacagacacatcaaaaggtctaatggaagaaggatatatcatggaagttgatgatgta
attacagttacgtcagaaactaaaacaggtgcttattgggcaactagaactatcttacaa
gctttaaaacaaagtgattacactacaattgctaaaggtgaaacaagagattatccactt
tatgaagtacgtggatttattatggatgtagctcgtaagacatttactttagattattta
aaacaacttgttaaagaaatgtcatggtataaaatgaatgacttccaagttcatttaaat
gacaatttaattccattggaatattattcacaaaatggaatggatcctatggatgcttat
tctgcattccgtttggaatctgatattaaaaaaggtggaaataacggacttaaccaagct
gatttaacaagtactgatttattctatactaaagatgaattccgtgaatttattaaagat
tcaagagaattaggtgttaatattgttcctgaaattgatacacctgctcactcattagct
ttaacaaaagttcgtcctgatttacgtaatggtacatatgggcgtgaaaacgatcatttg
aatttagttagtaaatataatgaaagtttagaatttgtacaatcaattttttcagaatat
atgactgaagaaaatccagtatttgatagtcaaacaactgtacatattggtgctgatgaa
tataacgcctcttctcaagcatatcgtaaattcgttaatgatatgttagactttgttgaa
ggaactggtcgtaaagccagagtttggggaagctttactcaagctagccaaggtgaagat
atcgatgctgaaggtgtagaaattaatttatggaactttggttatgctaatatggatcaa
atgtatgaagatggatttgatttaattaactgtaatgatggaaattattatattgttcca
aatgccggttattactatgactatttaagtgattcaacaatgtacaaccttgatatcaac
actattagcggtgtaacaatacctgctggtgatgatcaaatgaaaggtggagcttttgct
gtatggaatgacatgactgactacttagataatggagttagtgaatatgatgtatatgat
cgtattgaacgtggattaccattatttgcagcaaaactttggggtaaaggtgacatgaac
cttgaagaagcaaaagctacttctgattctttaggtgatgccccaggtactaattttgga
tatgaagtagaaagtaaagaagatgctattttaaatatgccaatggatgaatatgaagat
acatctgcaaatgaccatcaaattgaacaaggtgttaatgctcaaattgaaacagttgat
ttcaaaaatgcattaagattaaatggtggtcaaagctatatttctactgatttagaaact
gtaggattgggtaatgatttacgtgtaaaagtaaagagaacatctgattcaacagaagaa
caaattttatttgaaagtccttatggaaatatcaaagctgttcaaaaagatacaggaaaa
gttggtttctcaagagaaagatttgatttttcatttaactatacacttccagttaatgaa
tgggttgaattagaatttaagaaccaacaaaatagaatctctctatatgttaacggtgaa
ttagtagatacattaggagatgatgaaagaattgaaggaagaccaatgttagcaacaaca
atgttcccaattcaaacaatcggtagcaaaacaaatgctttcattggatatgttgatgat
ttacgtttaggtaaaaatgatacatttgcttcaacaatggcacttgattatgcaatctgg
aatggtgaagctgtattaactaatatggctaatgaacaattacgtacagttattgatgaa
gctaaatcagttttaactgaatatgcaccttcaaaagctacagttgattcatatgtaagt
caaattaatgatttattatctcaaatggattataaaaaagctgattatagtagattaaat
gcttatttagcacttactaaagatttaagtgaatttactgatgaaagtgttgcaagtgtg
aatcaagtaatagaaggtattcgtttaaatcttccagttcaattacaaagtacagttgat
gcttatgaaaaagcattagtacaagctcttgataatcttgaacttaaagataaaacagat
cctaatttagttgattcttctaaattaactgctactgcatcaagttatcaacaagatgga
tcaaatccatcaaatgtacttgatggttcaacttcaactatgtggcattcagcatggaat
attacaacaatgcctcattacattgatttagaaattgatgaaagtacagaaataaaagga
ctcatttatactcctcgtcaatcaggaagcaatggtaacttattagaataccaaatccaa
gtaagtgataatggtgtggattatgaaacaattgcaactggaacattagaaaataatgcg
caagctaaaacaattaattttgctccagttacaacaaaacatgtacgtttagtttatgta
agagctgtaaataacaatgcctcagcttcagaaatcagtttaattcaagctaaggtaaat
cctgatattgaaggattacaagcaataattgataatgctaaatcaatgagtaatgttgga
tatactgatgaaacatggacagcattccaagatgtaattaaagaagcagaagctctagtt
aatttggaaaatccaggtgctaatgaagtagaagcaatgaaacaaacaattgcttcaagc
attgttgcacttcgtcttagcgaagaagaactagtagttgctgataaaacagcattacaa
attgcagttgatttagctgataaagtaactgataaagatttagaaaatgtagttcctgta
gttgcagaagaatttaaagcagcattacaagaagcaaaagaaattttagctgatgaaaca
gctagtcaagaagatgttaatgcatcatttgatcgacttgcaagtgtaatgcaaaaacta
gaattctacaaaggggataaaacagcattaaaagcatttattgatgatgtaagtaattta
gattcaactaaatactcaacagatacatgggcagcatttgaaaaagaattaaatgaagca
attgctgtatatgaagatttaaatgcaatgcaagaagaagtaaataatgcacataaagaa
ttagtaacagcattcttgaacttaagattaattccagataagagtttattagaagaatta
atcaataaggcagaaggattaaatagtacaaactatacaaaagcaacatttgatggatta
aaagatgcattaaatgaagcaaaagcagtatttaatgatccaaatgcaacacaagaacaa
gtaaataatgcaaaagatgtattagaaaaagcaatcaatagcttagaagtaattacaaca
gtagataacacaccaagtacaccggtagacaatggtgatactacaagtgttaaaactggc
gatactacaaacttatggtattcacttgctactttaacacttgcatcagttgcattatat
ggaagtaaaaaaagaaaaaaataa
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