Thomasclavelia spiroformis: NQ543_07810
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Entry
NQ543_07810 CDS
T09467
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tsf
Thomasclavelia spiroformis
Brite
KEGG Orthology (KO) [BR:
tsf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsf03016
]
NQ543_07810 (truB)
Enzymes [BR:
tsf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NQ543_07810 (truB)
Transfer RNA biogenesis [BR:
tsf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NQ543_07810 (truB)
Prokaryotic type
NQ543_07810 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Lectin_leg-like
Motif
Other DBs
NCBI-ProteinID:
UWO88902
LinkDB
All DBs
Position
complement(1643070..1643912)
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AA seq
280 aa
AA seq
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MDGIILINKPSGMTSHDVVNKLRKILKTKKVGHCGTLDPDATGVLVVCVNKATKVLQFLT
SDSKEYIATLSLGTSTDTYDASGKVLEKKEYSGLDKQVIIDCFNNFVGKQIQKPPIYSAI
KVNGKKLYEYARNGEEVEIPTREVEINYLEIMDIKDNLIKFKVGCSKGTYIRSLCFDLAK
ALGYPGHMQDLIRTKSGNFSIEKCYTLEQIENGDFEYLSLEEALNSYRKIVIENEKIVYH
GKKIKSDIDEQVVICNKNNQVLAMYGPDGNGYLKNIRGLW
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggatggaataatattaataaataaacctagtggcatgactagtcatgatgttgttaat
aaattaagaaagattttaaaaacaaaaaaagttggacattgtggtactttagatcctgat
gctacaggagtattagttgtttgtgtaaataaagcaacaaaagttttacagtttttaaca
agtgatagtaaagaatatattgcaactctatctttaggaacaagtactgatacttatgat
gctagtggtaaagttttagaaaagaaagaatatagtggtttagataaacaagtaattatt
gattgttttaataattttgtaggtaagcaaatacaaaaaccacctatttattcagcaatt
aaagttaatggtaaaaaattgtatgaatatgcaagaaatggtgaagaagtagaaattcct
acaagagaagttgaaattaattatcttgaaattatggatataaaagataatttaattaag
tttaaagttggttgttctaaaggaacgtatattcgttcgttatgttttgatttggctaaa
gcattaggttatcctggtcatatgcaagatttaataagaactaaatcaggtaattttagt
attgaaaaatgttatacattagagcagattgaaaatggtgattttgaatatcttagttta
gaagaagcattaaatagttatagaaaaattgttattgaaaatgaaaaaattgtttatcat
ggtaaaaagattaaatctgatatcgatgaacaagtagttatttgtaataaaaacaaccaa
gtattggctatgtatggacctgatggtaatgggtatttgaaaaatattagaggactatgg
taa
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