Thomasclavelia spiroformis: NQ543_08870
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Entry
NQ543_08870 CDS
T09467
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
tsf
Thomasclavelia spiroformis
Brite
KEGG Orthology (KO) [BR:
tsf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsf03400
]
NQ543_08870
DNA repair and recombination proteins [BR:
tsf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NQ543_08870
Archaeal homologous recombinant proteins
NQ543_08870
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
DNA_pol_E_B
SPP1_Dit
LpxI_N
Motif
Other DBs
NCBI-ProteinID:
UWO89072
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Position
complement(1837048..1838178)
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AA seq
376 aa
AA seq
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MRFLHISDIHLGKLLFQQNLLEIQIDLLNQIINYLVDNDIDVLIMAGDIYDRSVPSNEAI
EALNDFLSLLILKHHKKVLMIAGNHDSATRLSFASGLLKQEGLYIEAFVQEEMKPVVIDG
VNFYLLPFFKPSYIRYLYNDESITTYQDAFAAYMKRQKINLDETNVLITHQFIAGNKEVI
KSESEAVLSVGGSEIIDVSLVKQFDYVALGHIHAPQQISCDTIRYSGSLMRYSFDEVKQK
KSIVDVSIANKKATYQLVELKPKQDLIKITGYFDEVMNYDNNHNDFIAVELLDTKIVPNA
IDYLRKKYENVLQITYPNLISKQITNNTKADIGFEKLSSLELFEQFYEKIKGSKLDKEAK
ALVAEILKEEHNSDTK
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgagatttttacatattagtgatatacatttaggtaaattactgtttcaacagaattta
ctagaaatacagattgatttattgaatcaaataattaattatttagttgataatgatata
gatgttttaattatggctggagatatttatgatcgtagcgtacctagtaacgaagcaatt
gaggctttaaatgattttttatctttattgatattaaagcatcataaaaaagtattgatg
attgctggtaatcatgatagtgctacaagattatcttttgcaagtggattattgaaacaa
gagggattatatattgaggcttttgttcaagaggaaatgaaaccagttgtaattgacgga
gttaatttttatttattaccgttttttaaaccatcatatattcgttatttatataatgat
gaaagcattactacttatcaagatgcatttgcagcttatatgaaaagacaaaagatcaat
cttgatgaaactaatgtcttgattacacatcaatttattgctggtaataaagaggttata
aaaagtgaaagtgaagctgtattaagtgttggtggtagtgaaattattgatgtttcgcta
gttaagcaatttgattatgttgctttgggtcatattcatgcaccacaacaaatttcttgt
gatacgattcgttatagtggtagtttaatgcgttattcttttgatgaagttaaacaaaaa
aagagtattgttgatgtttcaatagctaataaaaaagcgacatatcaattagttgagtta
aaaccaaagcaagatttaatcaaaataacaggatattttgatgaagttatgaattatgat
aataatcataatgattttattgcagttgaattattagatacaaaaattgttcctaatgct
atcgattatttaagaaagaaatatgaaaatgttttacaaataacatatccaaatttaatt
tcaaaacaaattacaaataataccaaagctgatattggttttgaaaaactttcttcactt
gaattatttgagcaattttatgaaaaaatcaaaggaagtaagctagataaggaggcaaaa
gcattggttgcagaaatattaaaggaggaacataatagtgataccaaatag
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