Thomasclavelia spiroformis: NQ543_11290
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Entry
NQ543_11290 CDS
T09467
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tsf
Thomasclavelia spiroformis
Brite
KEGG Orthology (KO) [BR:
tsf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsf03016
]
NQ543_11290 (truA)
Enzymes [BR:
tsf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
NQ543_11290 (truA)
Transfer RNA biogenesis [BR:
tsf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NQ543_11290 (truA)
Prokaryotic type
NQ543_11290 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
UWO89519
LinkDB
All DBs
Position
complement(2365345..2366076)
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AA seq
243 aa
AA seq
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MVRVKCIVSYDGSKFYGFQIQNKLRTVQGEIQKALKKICEEEVTIHASGRTDAKVHGNKQ
VFHFDTLRQMPEKQWKRAINHFLPNDIYILDSLFVSEDFHSRYSATKKEYRYLLSTKEYS
PFETNYIYQYGRPLDLELMKDAANIFIGEHDFASFCSYDQYGNTIRELYKILIEDNNGII
TFTIVGNGFRRYMVRHIVGGLIQVGAKRITKKRLQEFLDSKGKEKCLFKAKPQGLYLYEV
FYD
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggttagagtaaaatgtatagttagttacgacggtagtaaattttatggttttcaaatt
caaaataaattaagaactgttcagggagaaattcaaaaagcattaaaaaagatttgtgaa
gaagaagtaacaattcatgcttcaggaagaactgatgccaaagtacatggaaataaacaa
gtttttcattttgatacattaagacagatgcctgaaaaacaatggaaaagagcaataaat
cattttttaccaaatgatatatatatattggattcgttatttgtaagcgaggattttcat
agtagatatagtgcaacaaaaaaagagtatcgttatttattaagtacaaaagagtatagt
ccttttgaaacaaattatatatatcaatatggtagacccttagatttagaattgatgaaa
gatgctgcaaatatttttataggagagcatgactttgcatctttttgtagttatgatcaa
tatggtaatacaattagagaattatataaaatactaatcgaagataacaatggaattata
acatttaccatagttggaaacggttttagacgttatatggtaaggcatattgtcggtggt
ttgatacaagtcggtgctaaaagaataacaaaaaaaagattacaagaatttttagatagt
aaaggtaaagaaaaatgcttatttaaagcaaaaccacaaggattatatttatatgaggta
ttttatgattag
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