Thomasclavelia spiroformis: NQ543_11940
Help
Entry
NQ543_11940 CDS
T09467
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
tsf
Thomasclavelia spiroformis
Pathway
tsf00300
Lysine biosynthesis
tsf00470
D-Amino acid metabolism
tsf01100
Metabolic pathways
tsf01110
Biosynthesis of secondary metabolites
tsf01120
Microbial metabolism in diverse environments
tsf01230
Biosynthesis of amino acids
Module
tsf_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tsf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NQ543_11940 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NQ543_11940 (lysA)
Enzymes [BR:
tsf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
NQ543_11940 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
UWO89636
LinkDB
All DBs
Position
complement(2505854..2507161)
Genome browser
AA seq
435 aa
AA seq
DB search
MVLQTEFAQIKNNNLYIDEIKATDLVEKYGTPLYVMSEGHIRQQFNTLKTKMLEKYENTL
PLFASKSFSCLAIYKIAKEYGIGIDCVSAGEISIALKAGFDPKKIYFHGNNKLPSEIEYA
LSHGVENLVIDNFYEIELVQEIAKKLNIVVNGVIRITPGVYAGGHDYIRVGAKDTKFGFS
SHDNTYLKAIKKVIDASNINFDGIHCHVGSQIEEIQAYVLAMNKFVDIAYEIYDIFGITI
NKLNAGGGFGICYTKADKPLEFELVVDTIMDIITKGFEARNLKRPMVLVEPGRYCVGNAG
ITLYTVGSYKNIKDIRDYISVDGGMTDNIRSSLYAAKYDAIIANKAEMPADRLVTVAGKN
CESGDILIKDIMLQDPKPGDILAMFSTGAYHYTMSSNYNQLPKPAVVFTYKGKSREVIRR
QTFDDLIYYDIDSKY
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggtattacaaacagagtttgcacaaataaaaaataataatttatatattgatgaaatc
aaagcaactgatttagtagaaaaatatggaacaccattatatgttatgagtgaaggacat
attagacaacaatttaatacacttaaaacaaaaatgcttgaaaaatatgaaaatacatta
ccattatttgcatctaaatcattttcttgtcttgcgatatataaaatagcaaaagaatat
ggaataggaattgattgcgtttctgcaggggaaatttcaatcgctttaaaagcaggtttt
gaccctaaaaaaatatattttcatggaaataataaattaccatcagaaatagaatatgca
ttaagtcatggagttgaaaatttagttatagacaatttttatgaaattgaattagttcaa
gaaattgctaaaaaattaaatatagttgttaatggcgtaataagaataacaccaggagta
tatgcaggaggacatgattatattcgtgtaggtgctaaagatactaagtttggatttagt
agtcatgacaatacatatttaaaagcaataaaaaaggttatagatgcatctaatattaat
tttgatggaattcattgtcatgttggtagtcaaattgaagaaattcaggcctatgtttta
gcaatgaataaatttgttgatatagcttatgagatttatgatatttttggaattactatt
aacaaattaaatgccggtggaggttttggaatttgttatacaaaagctgataaaccatta
gaatttgaattagttgttgatacaattatggatattataacaaaaggatttgaagcacgt
aatttaaaacgcccaatggtattagtagaaccaggacgttactgtgttggaaatgcaggt
ataaccttatatacagtcggatcttataaaaatattaaagatattcgggattatattagt
gttgatggcggaatgactgataatattcgttctagtttatatgcagcaaaatatgatgca
attattgctaataaagcagaaatgcctgctgatcgattagttacagtagctggaaaaaat
tgtgaatctggagatattttaattaaagatattatgttacaagatcctaaaccaggagat
attttagcaatgttttcaactggagcataccactatacaatgtcatctaattataatcaa
ttacctaaaccagctgtagtgtttacttataaaggtaaatctagagaagtaattagacgt
caaacatttgatgatttgatatattatgatattgattcaaaatattaa
DBGET
integrated database retrieval system