Turicibacter sanguinis: HLK68_00265
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Entry
HLK68_00265 CDS
T06584
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tsg
Turicibacter sanguinis
Pathway
tsg03410
Base excision repair
tsg03430
Mismatch repair
tsg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HLK68_00265 (recJ)
03430 Mismatch repair
HLK68_00265 (recJ)
03440 Homologous recombination
HLK68_00265 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsg03400
]
HLK68_00265 (recJ)
DNA repair and recombination proteins [BR:
tsg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HLK68_00265 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HLK68_00265 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HLK68_00265 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
ssDNA-exonuc_C
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QJS17847
LinkDB
All DBs
Position
complement(59575..61800)
Genome browser
AA seq
741 aa
AA seq
DB search
MLKSNFLWQWSESIGELELDFNSNLRDEVKQLILNRHLASEKSIDTFLSGEGPLYDPFLF
SDMKKSVDRINKAIENQEPILIYGDYDADGVTGTSILMRALRGLGAIVDYYIPNRFYEGY
GPNEDAFMQAISDGYKLIITVDNGISGLLEADILPPYGVDLIITDHHQPKECHPNAFSII
HPELDSSYPFHQLSGAGVALKLAQALIGDGLSEEYFAIAALGTIGDVVPLSDENRYIVKR
GLEAIRRTELCGLNALMNEAKIDKSEVDEVNVGFEICPRLNAPGRMDEAALAVELLISDD
EMEAALIATQIESFNLERQKVTQKVLDQASTLMTPKQLEDKKVVLLYQPNWHEGILGIVA
GRLSKLWQKAVFVLTDDHDGFVKGSARAVEGYHLFDLLNQNEDLIERFGGHALAAGITLA
PENIQPLEDKLNADLRGIKIQPMQRVDLNLSLEKIDLELVEDLAVLAPYGEGNRPPVIGI
EQVKVKNIKAIGNKLQHLKFTIYDEAHQLDAIAFNKADLMIYLTPDTLFDFIGEIKINEW
NGNRTVQFHVMDVKCDEFQLLDLRNKQVYEQNREKLIHATLYSEVTETSEISTLIIDKIP
SSKEQLWALIKEHPIQNIVLAPLPNHVTFAPREKFITVYKLVKQHSPIHLNDQMYSYFMR
IGISKNELLFILQVFFEIELVIIKNGSVFSTDYQMKRDLSEAPTYQSQQSKLLMLEFFEL
TTWSELKNSFINAREEITHES
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaaatctaattttttatggcagtggagtgaatcaatcggggagttagaacttgac
tttaattcaaatcttcgtgatgaagttaaacaactcattttaaatcgtcacttagcgagt
gagaagagtattgacacctttttaagcggtgagggtcctttatatgatccctttttattt
tcggatatgaaaaagagtgttgatcgtataaacaaagcaattgaaaatcaagagccaatt
ttaatttatggggattatgatgctgatggtgtaacaggaacttctattttaatgagagca
ttaagagggctaggagccatcgtagattattatatcccaaatcgtttttatgagggatat
gggccgaatgaagatgcttttatgcaggctatttcagatggatataagttaattataacg
gtggataatggaatatcaggtctattagaagctgatattttacctccttacggggttgat
ttaattattaccgaccatcatcaaccaaaggaatgccacccaaatgctttttcaattatt
catccggaattagattcatcttatccatttcatcaattatcaggagctggagttgccttg
aaattagctcaagctttaattggagatgggttatcagaagagtattttgctattgcagct
cttggaacaattggagatgttgttcctttaagtgacgaaaatcgttatatcgttaaacgt
ggacttgaggcgattagacggactgagttatgcgggttaaatgcgctgatgaatgaagca
aagatagataaatcggaagtggatgaagttaatgtcggatttgaaatttgtccaaggtta
aatgcgccaggacgaatggatgaagcagcgttagctgttgaacttttaattagtgatgat
gagatggaagccgctttgattgcaacacaaattgaatcttttaacttagaacgtcaaaaa
gtaacgcaaaaagtattagatcaggcaagtacactcatgactccaaaacaactagaagat
aaaaaagtggttttattatatcaaccgaactggcatgaggggattttaggaattgttgca
ggtcgattatcgaaattgtggcaaaaagctgtctttgtcttaactgatgatcatgatgga
tttgttaaaggatcggcaagagcggttgaggggtatcatttatttgatttactcaatcaa
aatgaagacttaatcgaacgttttgggggacatgcgcttgcggctgggattacgttagct
ccagaaaatattcaaccgttagaagataagttaaatgctgatttaagagggattaagatt
caaccgatgcaacgggtagacttaaatttatcacttgaaaaaattgatcttgaattagtt
gaggatttagctgttttggcgccttatggtgagggcaatcgtcctccagtgatcggaatt
gagcaggttaaagttaaaaatattaaagcgatcggaaataagttacaacatttaaagttt
acgatttatgatgaggctcatcaactagatgcaattgcgtttaataaagcggatttaatg
atttatttaacgcctgatacattgtttgattttattggagagattaaaattaatgaatgg
aatggaaatcgaacggttcaatttcatgtcatggatgttaaatgtgatgagttccagttg
cttgatttaagaaataagcaagtttacgaacaaaatagggaaaagcttattcatgcgact
ttatattctgaggtaactgaaacatcagaaataagtacgttaatcatcgataaaattcca
agctctaaagaacagttgtgggcacttataaaagagcatccaattcaaaatatcgtttta
gctcctttaccaaatcacgtgacatttgcaccgagagaaaaatttattaccgtgtataag
ctagtcaaacaacacagtccaattcatttaaatgatcaaatgtatagttactttatgcgc
attggaattagtaaaaatgaattattattcattttgcaggtgttttttgagatagaactt
gttataataaaaaatggttcggttttttcaaccgattatcagatgaagcgtgatttatca
gaagctccaacgtatcagtctcaacaatcaaagcttttgatgcttgaattttttgaattg
acgacgtggagtgaattgaagaacagttttattaacgctagggaggaaataactcatgaa
tcttaa
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