Turicibacter sanguinis: HLK68_01145
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Entry
HLK68_01145 CDS
T06584
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tsg
Turicibacter sanguinis
Pathway
tsg03030
DNA replication
tsg03430
Mismatch repair
tsg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HLK68_01145 (dnaE)
03430 Mismatch repair
HLK68_01145 (dnaE)
03440 Homologous recombination
HLK68_01145 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsg03032
]
HLK68_01145 (dnaE)
03400 DNA repair and recombination proteins [BR:
tsg03400
]
HLK68_01145 (dnaE)
Enzymes [BR:
tsg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HLK68_01145 (dnaE)
DNA replication proteins [BR:
tsg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HLK68_01145 (dnaE)
DNA repair and recombination proteins [BR:
tsg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HLK68_01145 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QJS17965
LinkDB
All DBs
Position
complement(201166..204198)
Genome browser
AA seq
1010 aa
AA seq
DB search
MSFVHLQVRSAYSLLSSSIKIKELVDLALENQMSCLALVEEGTMHSAIKFYNACRRVNVK
PLIGMSVNVQGDSFIDEWVILARNQCGYQGLLKIASFIAKQEGVVLYEQVLPFVQDLVVI
TSGEHGMLCSGIEEYKEERLLQYYESYLKSIPHLYIGLMRVNQRTYELSKHLISFASNVN
RPIVALNDVRYLKKEDAKTLTLLQAIKQNQSVEELPLVDYERYFKSECQMKELFADVPNA
LMQTEQIANDCEVEIPLHQSLLPKYQTPEGVSSDSYLEALCFKGLEKRYGHLEYANRLKY
ELSVIHKMGFSDYFLIVWDFVRYAKSHDIYVGPGRGSAAGSLVAYVLGITNVDPIKYELL
FERFLNPERITMPDIDIDFQDNRRDEVIQYVQNKYGSHCVVQIATFGTFQSRSAWRDLAR
VHQVETTLINKVASFIYSGSTLKEIYEQTKGLRDFFSTYPKLEAIYKEAEKIEGLPRHTS
IHAAGVIISDHDLTDYTAIMEGPTGIYVSQYEAEDLEMIGLLKMDFLGLKNLNMLQQITT
LIKSSVAPEFDINKIPYDDLKTYEMISQGQTTGVFQLESEGMRQVLRAVRPNCLEDIIAC
NALFRPGPMEGIPLFAARKHHEQPIEYYHPSLQYILSKTYGIIVYQEQIMQIANVVSGYS
LGEADVLRRAVSKKKKEILEREQKTFVEKAIERGYHQEIATQLYELILKFANYGFNRSHA
VAYSMIAYQMAYLKRHYPSYFMTVALSNVIGSESNTAQYVKEAKQLDILVLPPSINSSGL
MYQIENENIRFSLLPIKHIGMNLARQIVAERERGLYKSFYDFVSRTRSFLNQRAYEGLID
VGAMDEFGYNRTTLHHNLTAILDFSKYDGGLFETDFEIMMMKETLSSAEKMKREKELLGF
YLNSHPIHLMRDQAKEKGWYFPSDLIHLNVSTITCVGFVEKFREIRDKKGKLMAFMDISD
ENGTVSVTIFSDVYKSEYKALLGKIVVINGRVSIRNSEKNINLSKIIAIS
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgtacatttgcaagtgcggtcagcctattcactgttaagtagttcaattaag
attaaagaacttgttgatttagcacttgaaaatcaaatgagttgtttagctttagttgaa
gaggggaccatgcatagtgcgattaagttttataatgcttgtcggcgtgtgaatgttaag
ccgctgatcggaatgagtgttaacgttcagggagattcatttattgatgaatgggtaata
ttggcgcgtaatcagtgcgggtaccaagggcttttaaaaattgcctcttttattgcgaag
caagaaggtgttgttctttatgagcaagtgttgccctttgttcaggatttagtcgtgatt
acaagcggtgagcacgggatgctttgtagtggaattgaggaatacaaagaggagcgtttg
cttcaatattatgagtcatatttgaagtctattccgcatttgtatatcgggctgatgcgc
gttaatcaacgaacatatgagttgtcaaagcatttgatttcttttgcaagtaatgttaat
cgtccgattgtggcactcaacgatgtcaggtatttgaaaaaagaggatgccaagacgtta
acgttgttacaggcgattaagcagaatcaatcggtagaagagttgccacttgttgattac
gagcgttattttaagagtgagtgtcaaatgaaagagttgtttgcagatgtaccaaacgct
ttgatgcaaactgagcagattgcaaatgattgtgaggtagaaattccactacatcaatcg
ttattgccgaagtatcaaacgcctgagggggtatcttctgattcttatttagaggcactt
tgttttaagggacttgagaaacgctatggccatttagagtatgctaatcgattgaagtat
gagttatcggtcattcataagatgggattttcggattatttcttgattgtctgggatttt
gtgcgttatgcgaaaagtcatgatatttatgtaggtcctggtcgtggctcagcagcggga
tcattggtggcgtatgttttaggtattacgaatgtcgatccgatcaagtatgagttgtta
ttcgagcgatttttaaatcctgaacgaattacaatgccagatattgatattgattttcag
gataatcgacgggatgaagtgattcaatatgtacagaataagtatgggagtcactgtgtt
gttcagattgcaacgtttggaactttccagtctagatctgcctggcgtgatttagcacgt
gttcatcaggtggaaacgactttaattaataaagtggcgagctttatttattcaggaagt
acgttgaaagaaatttatgagcaaacaaaaggattacgagattttttctccacttatcca
aagcttgaagctatttataaagaggctgaaaaaattgagggattgccacgtcatacgtcg
attcatgcagcgggtgttattattagcgatcatgatttaacagattatacagcgattatg
gagggtccaacaggcatttatgtctctcagtatgaagctgaagatttagagatgattggt
ttattaaagatggatttcttaggtttaaaaaatttaaatatgttacaacaaatcacgact
ttaattaaaagtagtgtcgcacctgagtttgatattaataaaattccatatgatgattta
aagacatatgaaatgatttcacagggacaaacgacgggggtcttccagttagaatcagaa
ggaatgcggcaggtgttaagagcggttcgacctaattgtttggaggatattattgcttgt
aatgccctgtttcgaccaggaccgatggaaggaattccgttatttgcagcaaggaagcat
catgaacagccgattgaatactatcatccaagtttacagtatatcttatctaaaacgtat
ggcattattgtttatcaagagcagattatgcagattgcgaatgtggtatcaggctattct
ttaggagaagctgatgttttaagacgtgccgtgtcgaaaaagaagaaggaaattttagag
agagaacagaagacgtttgttgagaaagcaatagaacgtggttatcaccaagagattgcc
acccagttgtatgagttaattttgaagtttgcaaattatggatttaatcgaagccacgca
gtggcgtatagtatgattgcttatcagatggcttatttgaagagacattatccaagttat
tttatgacggtggctctttcaaatgtgattggtagtgaaagtaatacggcacagtatgta
aaagaggcgaaacagttagatattttagtgttaccgccgtcaattaatagtagtggttta
atgtatcagattgaaaatgaaaatattcgatttagtttattaccgattaaacatatcggg
atgaatttagctcggcaaattgtggcggagcgtgaacggggattgtataagagtttttat
gattttgtgagtcgtacaagaagttttttaaatcaacgtgcctatgaggggttaattgat
gtgggagcaatggatgagtttgggtataaccggacaactctacatcataatttaactgcg
atcttagatttttcgaaatatgatggcgggttgtttgagactgattttgagattatgatg
atgaaggagacgttgtcatcagctgagaagatgaagcgggaaaaagaattgcttggtttt
tatttgaattctcatccgattcatttaatgagagatcaggcaaaggagaagggttggtat
ttcccgagtgatttgattcacctaaatgtttcaactattacgtgtgtcggatttgtggaa
aaatttagagaaattagagataaaaaaggaaagctgatggcatttatggatatttctgat
gaaaatggaacagtgtctgtcactattttttctgatgtttataaatcagaatataaagcg
ttattagggaaaattgtggttattaatggacgtgtttcaataagaaatagtgaaaaaaat
attaatctcagtaaaataatagcgatttcatga
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