Turicibacter sanguinis: HLK68_03240
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Entry
HLK68_03240 CDS
T06584
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
tsg
Turicibacter sanguinis
Pathway
tsg03030
DNA replication
tsg03430
Mismatch repair
tsg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HLK68_03240 (holB)
03430 Mismatch repair
HLK68_03240 (holB)
03440 Homologous recombination
HLK68_03240 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsg03032
]
HLK68_03240 (holB)
03400 DNA repair and recombination proteins [BR:
tsg03400
]
HLK68_03240 (holB)
Enzymes [BR:
tsg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HLK68_03240 (holB)
DNA replication proteins [BR:
tsg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HLK68_03240 (holB)
DNA repair and recombination proteins [BR:
tsg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HLK68_03240 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_5
NUP120_helical_2
AAA_22
AAA_18
Hirudin
Motif
Other DBs
NCBI-ProteinID:
QJS18347
LinkDB
All DBs
Position
complement(667590..668582)
Genome browser
AA seq
330 aa
AA seq
DB search
MKGWETIKDRQQEVVRFLINSYQKNRLVHAYILEGPKGVGKLFVAKNFAKMLLCESDDRI
CGTCRHCQMIESDGHVNVYMIRPDGNSIKKEQIQELQSEFSKMAAEDCAKVYIIEDADKM
SVSAANSLLKFLEEPKANTYAIMLTQNKQKLLPTIRSRSVILSFKSLSNESLIQQYVEAG
VSQHAPIISALTQNIDEGIELAESAHFNSLIELVLKIEDCFVKTNFDPSIVLARHQDLVK
EKDAQFLFLKLYMIYYEDVLKLKVGKTKDLRYRMYTAPLSSSEEANSLAICLKKLRALMD
AEKHLMANANVLLCFDQLFLEMKGGFIDAI
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaggttgggagacaattaaggatcgccagcaagaggtggtgcgctttttaatcaat
agttatcaaaaaaatagactggtgcatgcgtacattttagagggacctaaaggtgttgga
aagttgtttgttgcgaagaattttgctaaaatgttattatgcgagtcggatgataggatt
tgtggtacgtgccgtcattgtcagatgattgagtctgatgggcatgtgaatgtttatatg
attcgaccggatggaaatagtattaagaaagagcagattcaagagcttcagtcggagttt
tcaaagatggcagcggaggattgtgcaaaggtttatattattgaggatgctgataagatg
tctgtgagtgcggcaaatagtttgcttaagtttttagaggagccgaaggcgaatacttat
gcgattatgttgacgcagaacaagcagaagttgcttccgacgattcgttcacggtctgtc
attctttcatttaagtctttatcgaatgaatctttaatacagcaatatgttgaagcggga
gtgtcgcaacatgctccgattatttcggctttgactcaaaatatagatgaaggtatcgag
ttagcagagtcagcgcattttaattcgttgattgagcttgttttgaaaattgaggattgt
ttcgtaaagacgaattttgatccctcaattgtgctagctaggcatcaagatttagttaaa
gagaaggatgctcagtttttatttttgaagctttatatgatttattatgaggatgtcttg
aaattaaaggtgggtaagacaaaggatttgcgttatcgtatgtatacggcgccactttcg
agtagtgaagaagctaattcgcttgcaatttgtttgaagaagctacgagccttgatggat
gcagaaaagcatttgatggctaacgcaaatgtgttgctttgttttgatcaactattttta
gaaatgaagggaggatttattgatgcaatatga
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