Turicibacter sanguinis: HLK68_04945
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Entry
HLK68_04945 CDS
T06584
Name
(GenBank) DUF1080 domain-containing protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tsg
Turicibacter sanguinis
Pathway
tsg00040
Pentose and glucuronate interconversions
tsg01100
Metabolic pathways
tsg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tsg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
HLK68_04945
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HLK68_04945
Enzymes [BR:
tsg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
HLK68_04945
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GFIT
Motif
Pfam:
Pectate_lyase_4
3keto-disac_hyd
Glyco_hydro_59_C
Laminin_G_3
Trypan_PARP
TS_C
DUF6250
DUF1583_N
Motif
Other DBs
NCBI-ProteinID:
QJS18636
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Position
1002199..1004220
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AA seq
673 aa
AA seq
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MKLTKKHLSYYSFAFMTASLLLTQKSDVLASNIYFSEDFESNYDQWEIQRGGFNIILDET
NTIGHTSTNSEGRIMRGDLSWTDYSISADMKVLDFNGSNRAFLCGRYTDGNNFYGVSLSS
KNGLELRKKVNGASSVIAQVSTEIQQNTWYNVTLEMQGSILKVYLNGKLMIEATDDSLTA
GAVGLVASKVQVNYDNILVTDVDNTVTPDSTPNPDPCPMPQPTPEPEPTKDPTPEVKPEA
SQSKYSVAGFAEGVTGGGELDETSPYYIKVTNAKELGEALTKKASTKVIEIMNDIDLGWN
VIGPSAQVAPFTSHNTALTHPILKETGVSKIMIDGFDGLTIFSKNGAKLTHGALIFKRSN
NIVIRNIEFDELWEWDESTKGKYDKNDWDYITLEQSSNIWIDHCTFGKAYDGVVDSKKGT
TGLTISYSKFLPGRGEFYEAMFKAMEANQSAYPMYQFLRSQNLSQETIMAVAAPQKKTHL
IGATEMATDNKDLEITMHHNYYLDSQDRLPRLRGGNAHVYNIVMDSQNAYKASTLIPSSV
AKAITNKGYSFNVTSNGAISTEGGAVLVENSAILGIKYPLRNNQKSASNSSYTGKILALD
TIYEYKDISYRGNSTDPNSPLSPEPATILKFSWNGFNELPYNYTLDDIQNLLSTLKETVG
SGIIDLNWMKTIY
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
ttgaagcttacaaaaaaacatttatcttattatagcttcgcttttatgacagctagttta
ctactaacacaaaaaagtgatgttttagcatcaaacatatacttttcagaagattttgaa
tcaaactacgaccagtgggaaatccaaagagggggctttaatattattttagatgaaacc
aatacaattggacatacctctactaatagcgaaggtcgtatcatgcgtggcgatttatca
tggactgactacagtatttcagcagatatgaaagttcttgacttcaatggatctaatcgt
gcttttttatgtggccgatacacagacgggaataacttctatggggtaagtctaagcagc
aaaaatggattagaactacgtaagaaagtaaatggggcttcttcggtaattgcccaggta
agtacagaaattcaacaaaatacttggtataacgtaacactcgaaatgcaaggttctatc
ttaaaagtatatttaaatgggaaactgatgatagaagcaactgatgattctttaacagct
ggtgctgtaggactagtcgcaagcaaagttcaagtcaactatgacaatattttagtaact
gatgttgataacacagtaacaccagattcaacaccaaatcctgatccttgtccaatgcca
caaccaacgccagaacctgaacctactaaagatccgactcctgaagtaaaacctgaagcc
agtcaatcaaagtattcagtagcgggatttgctgagggtgtaactggtggaggtgaatta
gatgaaactagcccttactacatcaaagttacaaacgctaaggaattaggagaagctctt
actaaaaaggcttcaaccaaagtcattgaaattatgaatgatattgacctggggtggaat
gttattggaccaagtgctcaagtcgcaccatttacctctcataacactgccttaactcac
cctattttaaaagaaacaggtgtcagtaagattatgattgatggatttgatggtctgaca
atcttctctaaaaacggggccaaactcactcatggagctttaatcttcaaacgttcaaat
aacatcgtcattcgaaacattgaattcgatgaactctgggaatgggacgaatcaacaaaa
ggaaaatatgataaaaatgattgggattacatcacactagaacaatcaagtaacatctgg
attgatcactgtacatttggtaaagcatacgatggtgtcgttgactctaaaaaaggaaca
acaggactaactatttcatactcgaaattcctacctggtcgtggtgaattctatgaagca
atgtttaaagcaatggaagctaaccaatcagcctatccaatgtatcaattcctacgctct
caaaacctaagtcaagaaaccataatggccgttgcggcacctcaaaagaaaacccatttg
attggagctacagaaatggctactgataacaaggacttagagattacaatgcaccacaac
tactacttagattcacaggatcgattacctagacttcgtggtggtaatgcacacgtctat
aatatcgtgatggattcacaaaatgcctacaaagcctctactttaattccatcatcagtc
gctaaagccattactaacaaaggctatagcttcaatgtcacaagtaatggagccatctca
acagaaggcggtgcagtcctagtagaaaactcagctatcctaggtattaaatacccatta
cgaaataaccaaaaaagtgcctctaactcatcttacacaggaaaaatcttagcccttgat
actatctacgagtataaagatatctcctatcgtggaaacagtactgaccctaactctcca
ttatcacctgaaccagcaacaattctaaaattctcatggaatggatttaatgaactacct
tacaattatacattagatgacatacagaacttattatctaccttaaaagagacagtgggt
tcagggattattgatttaaattggatgaaaactatctattaa
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