Turicibacter sanguinis: HLK68_09125
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Entry
HLK68_09125 CDS
T06584
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tsg
Turicibacter sanguinis
Pathway
tsg03420
Nucleotide excision repair
tsg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tsg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HLK68_09125
03430 Mismatch repair
HLK68_09125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsg03400
]
HLK68_09125
Enzymes [BR:
tsg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HLK68_09125
DNA repair and recombination proteins [BR:
tsg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HLK68_09125
MMR (mismatch excision repair)
Other MMR factors
HLK68_09125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
RNase_T
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
DEDDh_C
DEAD
Rv2179c-like
AAA_11
AAA_12
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QJS19401
LinkDB
All DBs
Position
1883927..1886476
Genome browser
AA seq
849 aa
AA seq
DB search
MNLEEELTGLNDAQSEVVSNLNDNLLVMAPAGTGKTKVISLRVAGFINQGIEAKEILCLT
FTNKACHELAERLLKVTNGLAKEVFVKTFHSFCFQLIKEEAKNFGKISRDFSVMDEEDGK
FLVRQLMKDDYVIADLAYQYLQELKLYRLMIPKAYRDDYKRVVASFHQSEKAQKLQYSNR
RSDAGAYTLGFLAQYGCWLYETYQTYLLENHLVDFNDLIVYASELLEDEEILERWRERFK
VVMVDEVQDTSQFEYQLIEKLAKGKQFSVFGDFNQTIYEWRDSNPELILSQIMTTFNPKR
LELSLNYRSLKRLVQMSANYLQNAKKARLINPRLSPRVIEAANEEVGGRPVFYEAQTQQE
EMDFIIDHLKHYRLDDLANTVILTRTNKQNIQVSNFLRNVGIPCYLIEDLSLFRRKVVKD
LLAFVKFQLNPFDHLSLERLLPLICPEVSPELFNQTYRQRYVSYGMRMIDLFQEAAYEYE
EPYGLLKKQFEKGRIVIFDVESTGLDVTQDEVIQIAAIELVNGEYTRSFERFIKPSHSVG
DSALVHGFSDDYLNEHGEEAREVFLQFQAFVEGALLIGHNVQYDLKIVSSQMNRLGLMFE
NSMGYYDTLDIVRRLYPDLKNHKLDTVSAYVGVSHEPTHNAMDDILATKDVLVKSMDLLM
THHENRKKVMKFYEPHLWGAIQRLKEIQDCFETQPPHVAMKGLIDAFECEDEAHKQSIIE
LLNYIGATYHRLHHTNPHQPNLEIWIQMLNLMALSSSELDRVMKEENKLAIITVHQSKGL
EFDHVIIPFMSQGMFPLDFDGINQEEECRLFYVAMTRAKQSLLLTRHMKETSSSRRVKER
SQFISFLYS
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagaagaagagttaacgggtttaaatgacgcacaatctgaggtcgtttctaac
ctaaatgataatttattagtcatggctccggcaggaacagggaagacgaaagttatttca
ttacgagtagcgggatttattaatcaggggattgaggcgaaagagatattgtgcttaacc
tttacgaataaagcttgtcatgaattagcagaacgattgctaaaagtaacgaatgggttg
gccaaagaggttttcgttaaaacgtttcatagtttttgttttcaactcattaaagaagaa
gcgaaaaacttcggtaagatttcgcgtgatttttcggtgatggatgaagaggatggaaag
tttttagtgcgtcagttaatgaaagatgattatgtcattgccgatttggcctatcaatat
ttgcaagaattgaaactatatcgcttaatgattccaaaagcgtatcgtgacgattataaa
agagtggtcgcctcttttcatcaatctgaaaaagcacaaaaacttcaatattcgaataga
agaagtgatgctggagcatatacccttggatttttagctcagtatggttgttggttatat
gaaacatatcaaacgtatcttcttgaaaatcaccttgttgactttaatgatttgattgtt
tatgctagcgaattactagaagatgaggagattttagaacgttggcgtgagcgatttaag
gtggtgatggtagatgaagtacaagatacctcccaatttgaatatcaactgattgaaaaa
ttagcaaaaggaaagcaatttagtgtttttggggatttcaatcaaaccatttatgagtgg
cgtgattcaaatccagaactgattttgtcacaaattatgacgacatttaatccaaaacga
ttggagttatccctaaattatcggtctttgaaacgattagttcaaatgagtgccaattat
ttacaaaatgcgaaaaaagcacgcttaattaatccgaggctatccccacgcgtgattgag
gcagcgaatgaggaagtgggaggtcggcctgtcttttatgaagcacagacccaacaagag
gaaatggattttattatcgatcacctaaagcattatcgattagatgacctcgctaatact
gtgattctaacgcgaacaaataagcaaaatattcaagtttcaaactttttaagaaatgtg
gggattccctgttatttgattgaagatttaagtttatttagacgcaaagtcgtaaaagac
ttacttgcctttgtcaaatttcaacttaatccatttgatcatttatcacttgaacgattg
ttgccacttatttgtcctgaggtatctcctgagttatttaatcaaacgtatcgtcaacga
tatgttagttatgggatgagaatgattgatttgtttcaagaagctgcttatgagtatgaa
gaaccgtatggattattaaagaagcagtttgaaaagggacgaattgtcatttttgatgtg
gaatcaacgggtcttgatgtgactcaagatgaagttattcaaattgcagctattgaattg
gtgaatggtgagtatactcgttcatttgaacgatttattaaaccgagccactcggttgga
gactcagctttggtgcacggatttagtgatgactatttaaacgaacatggcgaagaggcg
agagaagtctttttacagtttcaagcgtttgtagaaggcgctttattgattggtcataat
gttcaatatgatttaaaaattgtgagtagtcagatgaatcgtttaggtctgatgtttgaa
aattcaatgggctattatgataccttagatattgttaggcgcctgtatccagatttgaaa
aatcataagttagataccgtcagcgcctatgttggtgtgagtcatgagccgacgcataat
gcgatggatgatattttagcaacaaaagatgtgctcgttaaaagtatggatttgttaatg
acgcatcatgaaaaccgtaaaaaagtcatgaaattttatgaacctcatttatggggagcg
attcaaaggttaaaagaaattcaagactgttttgaaacacagccgccacatgttgcgatg
aaaggtttaatagatgcttttgagtgtgaggatgaagcacataagcaaagtatcatagag
ttacttaattacattggggcgacctatcatcgcctgcatcatacgaatccacatcaacca
aatttagaaatttggattcaaatgcttaatttgatggcgttatcaagcagtgaacttgat
cgtgtcatgaaagaggaaaataagcttgcaattattacggtgcatcagtcaaaggggctt
gagtttgatcatgtgattattccatttatgagtcaggggatgttcccgctcgattttgat
gggattaatcaagaggaagaatgccgattattttatgttgcgatgactcgtgcgaagcag
agcttattattgacgcgccatatgaaagaaacctcttcatctagaagggtgaaagagcga
agtcaatttatatcgtttttatattcataa
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