Turicibacter sanguinis: HLK68_09630
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Entry
HLK68_09630 CDS
T06584
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
tsg
Turicibacter sanguinis
Brite
KEGG Orthology (KO) [BR:
tsg00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HLK68_09630 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsg03021
]
HLK68_09630 (rpoD)
Transcription machinery [BR:
tsg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HLK68_09630 (rpoD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
HTH_10
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
QJS19495
LinkDB
All DBs
Position
1994766..1996136
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AA seq
456 aa
AA seq
DB search
MSNPVLDEKKILEINNQLIKLGKKRGYLTYDEINNSFEQVQLDPEMISSFLDLYDSEGIS
IVKSEKIVETPEVGETEEEDTVLLLPDFDADEDEDNIPANFSTEDEVDLEEKFDEFEFTS
QFKINDPVRMYLKEIGRVELLSSQEEINFAKKIERGDISSEILEIRRKNEPLPEELLERI
DLLIQDAGEANDGNEFLIGVTELSDEEARRVIQEGEYAKKRLVEANLRLVVSIAKRHVGR
GMLFLDLIQEGNMGLIKAVEKFDYRKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMV
ETINKLVRIQRQLVQELGREPLPEEISEKMGIAPEKVREILKISQEPVSLESPVGEEDDS
HLGDFIPDADALSPSEFASNEMLKKELDDVLETLTDREERVLRLRFGLEDGRTRTLEEVG
KEFGVTRERIRQIEAKALRKLRHPSRSRRLKDFMEE
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatccggtacttgacgagaaaaaaattctggaaattaataatcaactaatcaag
ttaggaaagaagcgcggttatttaacatacgatgaaatcaacaatagttttgaacaagtt
caattagatccagaaatgattagttcatttttagatttatatgattcagaaggaatcagc
attgttaaatctgagaaaattgttgaaacgcctgaagttggtgagacagaagaggaagat
acagtcttattattaccagattttgatgctgacgaagatgaagataatattccagccaat
ttctctactgaagatgaagttgatttagaagaaaaatttgatgagtttgaattcacctca
caatttaaaattaatgatccagttcgtatgtatttaaaagaaattggacgcgttgaatta
ttatctagtcaagaagaaattaactttgcgaaaaagattgaacgtggagatatctcatca
gaaattttagaaatacgccgtaaaaatgagccgcttccggaagagttgttagaacgtatt
gatttattaatccaagatgctggggaagcaaatgacggaaatgagtttttaattggggtt
actgaattaagtgatgaagaagcacgccgtgttattcaagaaggtgaatatgcaaaaaaa
cgtcttgttgaagctaacttacgtttagttgttagtatcgctaaacgtcatgttggacgt
gggatgttattcttagatttaattcaagaaggaaatatgggattaattaaagcggttgaa
aaattcgattatcgtaaaggatttaaattctcgacttatgcaacatggtggattcgtcaa
gctattacacgtgcgattgcggatcaagcgcgtaccattcgtattccggttcacatggtt
gaaacaattaataaattagttcgtattcaacgtcaattagttcaagaattagggcgtgaa
cctttaccagaagaaatttctgagaaaatgggaatcgctcctgaaaaagtacgcgaaatt
ttaaaaatttcacaagaacctgtttcattagaatcaccagtaggtgaagaagatgattct
catttaggagatttcatcccagatgcggatgccttatcaccatctgaattcgcctcaaat
gaaatgctaaaaaaagaattagacgatgtgttagaaacattaacggatcgcgaagaacgt
gttctccgtttacgttttggacttgaagatggacgtactcgtacgcttgaagaagtagga
aaagaatttggtgtgacacgtgaacgtattcgtcaaattgaagcgaaggccttacgtaaa
cttcgccacccatctcgtagccgtcgtttaaaagacttcatggaagaatag
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