Turicibacter sanguinis: HLK68_10730
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Entry
HLK68_10730 CDS
T06584
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
tsg
Turicibacter sanguinis
Pathway
tsg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tsg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HLK68_10730
09124 Replication and repair
03420 Nucleotide excision repair
HLK68_10730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsg03021
]
HLK68_10730
03036 Chromosome and associated proteins [BR:
tsg03036
]
HLK68_10730
03400 DNA repair and recombination proteins [BR:
tsg03400
]
HLK68_10730
Enzymes [BR:
tsg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
HLK68_10730
Transcription machinery [BR:
tsg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HLK68_10730
Chromosome and associated proteins [BR:
tsg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
HLK68_10730
DNA repair and recombination proteins [BR:
tsg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HLK68_10730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
PDDEXK_1
HBB
Helicase_C
IstB_IS21
Cas_Cas4
Anillin
Motif
Other DBs
NCBI-ProteinID:
QJS19701
LinkDB
All DBs
Position
2211070..2213361
Genome browser
AA seq
763 aa
AA seq
DB search
MVIQKGVKEVVGYVYQQGDLNLEYFQANRAQHGTNAHQAIQKKYLDEECEVYLEMSVKHQ
EHDVILSGRMDLLLHRDERIIIGEIKSTTRRLELIEENDRPVHYAQAKVYAYLYLLKHPE
LNSVIVRLIYCNLDGTEERAFDQEYTLDELEPFMNHTLEVYLQWYFILLKSMQLKLKTAK
TLQFPFGEFREYQRELSGAVYQTIKQKKNLLLRAPTGIGKTMGTIFPSIKALSNTEQKIF
YLTAKTIGRDVAEKAFDRCHASGWQAKVTTITAKERICFMDEVKCDPKFCPYAAGYFDRI
NEATKDLFESEQLFNRSRIETYAKKHQVCPFEFSLAMASISDAVIGDYNYMFDPRAFLRR
FFEEPSSHIALIDEAHNLYDRACEMYSASLSKEPIQELKRLFKDRHKGLSKSLANLNMKF
IEYRHELEEKKVFDLFKEDMDLSFLNRAQDLLDVLEKYLYQHQDTEYKPQLMNLYFELHQ
FLRISDYFNESFRVRYERFGIEVKVSIVCLNPSLYLSEKMEKVRSTILFSATLHPLDYYQ
TVLLHEEACEKIFLPSPFKREHLDLYVQHGISTKYKQRERSLAHLIQMIYHVTRQRVGNY
MVFLPSYQYLEMVYEAYLALVQDEQELLFQQRDMSEEERDAFLEKFNETNVTTLVAFCVL
GGIFSEGIDLIGDRLIGSLIVGVGLPQINPLTEQRRDYFEEKFQKGYLYAYVYPGFNKVM
QAVGRVIRTDEDRGTVMLIDERYLEPTYLALFPYEWQHAKFIR
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggtgattcaaaaaggtgttaaagaggtggtgggatatgtctaccaacaaggcgattta
aacttagaatattttcaagctaatcgtgcacagcatgggacaaatgctcatcaagcaatt
caaaaaaaatatcttgatgaggagtgcgaagtttatctcgaaatgagtgtaaagcatcaa
gaacacgatgttattttaagtggtcgtatggatctattacttcatcgagatgaacgcatc
attattggagaaataaaatcgacgacccgacgattagagctcattgaagaaaatgaccgt
ccggtacactatgctcaggccaaagtctatgcttatttatatttacttaaacatcccgag
ctaaattcagtcatcgttcggttaatttattgtaatttagacgggacagaggagcgggct
ttcgatcaagaatatacacttgatgagttagaacctttcatgaatcacacattagaggtt
tacttacagtggtattttattttattaaaatcaatgcagttaaaattaaagacagccaaa
acccttcagtttccatttggggaatttcgtgaatatcaacgtgaactctcaggtgccgtg
tatcaaaccattaagcaaaaaaagaatttattattaagagcgccaaccggcatcggaaaa
acaatgggaactatttttccaagtattaaagcgttaagtaacacagaacaaaaaattttt
tacttgaccgctaaaacgattggacgggacgtggcagagaaagcatttgaccgttgccat
gcaagtggatggcaagctaaagtgaccactatcactgctaaagaaagaatttgttttatg
gatgaagtcaaatgtgatccgaaattttgcccttatgccgcaggttattttgatcgtatt
aacgaggcaactaaagatttattcgaatcagaacaactgtttaatcgctcaagaattgaa
acctatgctaaaaaacatcaagtttgtccatttgagttttcacttgccatggcgtcaatt
agtgatgcggttattggtgactataattatatgtttgatcctcgcgcttttttaagacgt
ttctttgaggaaccttcgtctcatattgcgctcattgatgaggcacataacttatatgat
cgagcctgtgagatgtatagtgcgagtttgtcaaaagaaccaattcaagagcttaaacgt
ttatttaaagaccgtcataaaggcttatctaagtcactcgctaatttaaacatgaaattt
attgagtatcgtcatgaattagaagaaaagaaagtatttgatttatttaaagaggatatg
gacttatcctttttaaatcgtgcccaagatttacttgacgtcctagagaagtatttgtat
cagcatcaggacacagaatacaaaccacaattgatgaatttatactttgaattgcatcaa
tttttaagaatctcagactattttaatgaaagttttagagtccgttatgaacggtttggc
attgaggtcaaagtaagtatcgtttgtttaaatccaagtctttatttgagtgagaaaatg
gagaaagttcgctcgaccattttattttcagcgacgctacatccactagattattatcaa
acggtgctacttcatgaagaggcgtgtgaaaaaatctttttaccatccccgtttaaacgt
gagcatcttgatttatatgttcagcacggaatttcgacaaaatataagcaacgtgagcgt
tcacttgctcatctcattcagatgatttatcatgtgacgagacaacgagttggtaattat
atggtctttttaccctcctatcaatatttagaaatggtttatgaggcttaccttgcgtta
gttcaggatgagcaagagttactttttcagcagcgggatatgagtgaagaagagcgtgat
gcctttttagaaaagtttaatgaaacgaatgtcacaacgttagtggctttttgtgtacta
ggaggtatctttagcgaaggaattgatttgattggagatcgtttaattgggtcattgatt
gtaggagtaggattgcctcaaatcaatccgttgactgagcaacgccgtgattactttgaa
gaaaagttccaaaaaggttacttatacgcttatgtttaccctggatttaataaagtcatg
caagcagtcgggcgcgtgattcgaacagatgaagaccgaggaacggtgatgttaattgat
gaacggtatttagagccgacttatttagctctatttccttacgaatggcagcacgcaaag
tttataagataa
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integrated database retrieval system
