Turicibacter sanguinis: HLK68_11105
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Entry
HLK68_11105 CDS
T06584
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tsg
Turicibacter sanguinis
Pathway
tsg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tsg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HLK68_11105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsg03019
]
HLK68_11105
03009 Ribosome biogenesis [BR:
tsg03009
]
HLK68_11105
Enzymes [BR:
tsg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HLK68_11105
Messenger RNA biogenesis [BR:
tsg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HLK68_11105
Ribosome biogenesis [BR:
tsg03009
]
Prokaryotic type
rRNA helicases
HLK68_11105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
UvrD-helicase
WSD
Motif
Other DBs
NCBI-ProteinID:
QJS19773
LinkDB
All DBs
Position
2287422..2288861
Genome browser
AA seq
479 aa
AA seq
DB search
MTAFNELQLSESILKSLTGLGYEHATEVQASVIPTVLNKQDLIVQSKTGSGKTAAFGIPI
CEMLDWDENKPQALILTPTRELALQIKEEISNIGRFKRIKVTAVYGKSPFKEQARELKQK
THIVVGTPGRVQDHLERGTLSLDKLSLFVLDEADEMLKMGFIEVVENIMNEAPRKRQTML
FSATMPDRIKKLSQHYLTHPQEIKIESPTLTTDLVEHALYEVREQEKVKLLQDLLMVENP
ERCMIFCSTKEAVDALYRNLSQKGYPIERLHGGLDQKERFETMKNFKIGRFAYLVSTDVA
ARGIDVSGVSHVINYDLPPEKDSFVHRIGRAGRAGQKGKAITFATRFDQRWLEEIQAYIG
FELPICERPSEDVTQQAKDGFMKKLNSRPTLRHEKTADVNREIMKLYINGGKKKKLRAID
FVGAITSVDGVSGEDIGIIDIQDNVTYVDILNGKGWTVIRGLKDKTIKGKKLRVQKAYE
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgacagcatttaatgagttacaactgagtgaatcgattttgaaatcattaacaggactt
ggatatgagcacgcgacagaggtacaggcaagtgtcattccaactgttttaaataaacaa
gatttgattgtgcaatctaaaaccggaagcgggaaaacagcagcgtttgggattccgata
tgtgaaatgttagattgggatgagaataagcctcaggcgcttattttaacgccaacacga
gaattagcactacaaattaaagaagagatttcaaatattggccgtttcaagcgaatcaag
gtaacggcggtttatgggaagtctccatttaaagagcaggctcgtgaattaaagcaaaaa
actcatatcgtcgtgggaacaccaggtcgtgttcaagaccatttagaacgtgggacgttg
tctcttgataaattatctttattcgtattagatgaagctgatgaaatgttaaagatgggg
ttcattgaggtcgttgaaaatattatgaatgaagcacctagaaaacgtcaaacgatgtta
ttttcagccacaatgccagatcgcattaaaaaattaagccagcattatttaactcatcca
caagaaataaagattgaatcaccgactttaacaacagatcttgttgaacatgcactatat
gaagttcgtgaacaagagaaggtaaaattattacaagatttattaatggttgaaaatcca
gagcgttgtatgattttctgttcaacgaaagaagcggttgatgccctgtatcgtaattta
tctcaaaaaggctatccaattgaacgtttgcacggaggactggatcagaaagaacgtttt
gaaacgatgaaaaacttcaaaattggtcgttttgcctacttagtctcaaccgatgtcgca
gctcgtgggattgatgtatcaggggttagtcatgtgattaactatgatctcccaccggaa
aaagattcatttgttcaccgtattggtcgtgccggtcgtgccggtcaaaaaggtaaggca
atcacatttgcgactcgatttgaccaaagatggttagaagagattcaagcttatattggg
tttgagttaccgatttgtgaacgtccaagtgaggatgtgacgcaacaagcgaaagatggg
tttatgaaaaaattaaattcacgtccgaccttacgtcatgaaaaaacggcagatgtaaac
cgtgaaattatgaagttatatatcaatggtggtaagaaaaagaaattacgtgcgattgat
tttgtgggcgcaattacgtcagttgatggagtaagtggcgaggatattggaattattgat
attcaggataatgtcacgtatgttgatattttaaatggcaaaggatggactgttattcgc
ggtctaaaagataaaaccattaaagggaaaaaattacgcgttcaaaaagcatatgaataa
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