Thermoanaerobacterium saccharolyticum: Tsac_1694
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Entry
Tsac_1694 CDS
T02137
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tsh
Thermoanaerobacterium saccharolyticum
Pathway
tsh03410
Base excision repair
tsh03430
Mismatch repair
tsh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Tsac_1694
03430 Mismatch repair
Tsac_1694
03440 Homologous recombination
Tsac_1694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsh03400
]
Tsac_1694
DNA repair and recombination proteins [BR:
tsh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Tsac_1694
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Tsac_1694
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Tsac_1694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
ssDNA-exonuc_C
Motif
Other DBs
NCBI-ProteinID:
AFK86700
UniProt:
I3VW05
LinkDB
All DBs
Position
1763384..1765837
Genome browser
AA seq
817 aa
AA seq
DB search
MIYNWVSKKIKDDKLVQEIAIKFNLKTYVAQTIVNRGYDDLEKVYEYLNPTLNALNNPYL
LEGIEKAVSIIKYHVGLNNKITIYGDYDVDGITSTSILYMTLKRLGANVDFYIPDRLLEG
YGINMDAVKTLCDSGTKLIITVDCGIASLKEVQYARNLGLDIIVTDHHQVPDVLPEANCI
VNPHIKDCTYPYIELAGVGVTFKLCLALLGDEALEFLDIVALGTVADIVPLTGENRVIVK
EGLKMMRHTKNKGLRALINSVGLNEKDIDTYHVGFILAPRLNAAGRLESAVLCVNLLVTD
NPVEADRIAAYLNSENAKRQEIEKKILEEAIMKVENDVDLEKEKVIVLYSENWHPGVIGI
VSSRITESYHRPSILISLSDGFGKGSGRSIKGFNIYEAIKYAGDCLINFGGHEMAAGLTI
DSSKIDDFKLKINEYAKTKLTSFDMMPIIEVETSIDDVLDLEGANQISLLEPFGSGNPMP
MYVIKNLVAKQIFLFGDNKHVRIMAEKNDAMYNIVLFNRACEFDKISAGAVLDIAGFAKI
NEWNGEKKLEIIAKDVLVKEKNVLFFRNLYNTLIGFNDDFRGLESYNFIDARNIDDKRSY
VLKLFKNDDSTAVIINTRYHIKEIINYLNACNYYNFKLSNKIVDAKNAVLWCVNADEIMQ
LLSKYKNIVFYDIPFDSKMFYNILANNRGSVVHLLFGKKDLKSSLNDICNIVPRRSDFAK
VFLSIKENSDTLLLRDQIYDYFNLNSIKSMICLKILKDNGLINIEESDNIFVLRRNSVDS
KVDIKDHQLLKKLYMAEKSFIKFAFQILKKNVKEETA
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgatctacaactgggtatctaaaaaaatcaaagatgacaaattggtgcaggaaattgca
atcaaatttaatttaaaaacttatgttgcacaaaccatcgtcaatagaggatatgatgat
ttggaaaaagtttatgaatatttaaacccaacattaaacgcgcttaataacccttacttg
ttagaaggaatagaaaaagcggtttcaatcataaaatatcatgtcggattaaataacaaa
ataacaatatatggtgattacgatgtggatggcataaccagcacttcaattttatatatg
acattaaaaaggcttggtgccaatgtagatttttacataccggatcgcctcttagaaggt
tatggaataaacatggatgctgttaaaacattgtgcgattctggaacgaagcttattata
accgtcgattgtgggatagcgtcattaaaggaagtgcagtatgccagaaaccttggactt
gatattattgtcacagaccatcatcaggttccggatgtattgccggaggctaattgtatc
gtaaatccacacattaaagattgtacatatccatatatagaattagcaggagttggagtt
acttttaagctttgtttggcactcttaggggatgaagcattggaatttcttgatatagtt
gctttaggcactgtggcagatatagtgccgcttactggagagaatcgtgtgatcgtaaaa
gaaggattaaagatgatgagacacacaaaaaacaaaggattaagggctttaataaattct
gttggccttaatgaaaaagatatagatacataccatgttgggtttatattggcccccagg
ctaaatgctgcaggaaggttggaaagtgccgtattgtgtgtgaatttgttggtgacagat
aatcctgtagaagctgacagaatagcagcctatttaaacagcgagaatgcgaaaaggcag
gaaatcgagaaaaagatattagaagaagctatcatgaaggttgaaaatgatgtggactta
gaaaaagaaaaggtcattgtcctttatagtgaaaattggcatcctggtgtaattggcata
gtttcttcaaggataacagaaagctatcatagaccgtctattttaataagtctcagtgat
ggttttggtaagggttcaggaagaagcataaaaggatttaatatatacgaggcaataaaa
tatgctggtgattgtttgattaactttggcggacatgaaatggctgcaggcttgactata
gatagcagtaaaatagatgattttaagcttaaaatcaatgaatatgccaagacaaaatta
acttcttttgatatgatgccgataatcgaggtagaaacttctattgatgatgtactggat
cttgaaggagcaaatcaaataagtttgttagagccttttggcagtggaaatcctatgcca
atgtatgttattaaaaatttggttgcaaaacaaatcttcctctttggagataacaaacac
gttcgaataatggctgagaaaaatgacgcgatgtacaacatcgttttattcaatagggct
tgcgaatttgataagattagcgcaggagcggttttagacattgcaggttttgccaagata
aatgaatggaatggagagaagaagcttgagataatagctaaagatgttttagtgaaagag
aaaaatgtattatttttcagaaatttatacaatactttaataggttttaatgatgatttc
cgaggattagaaagctataattttattgatgcgcgaaatatcgatgataaaagatcttat
gttttaaaattgtttaaaaatgatgatagcacagcagtcataataaatactcgataccac
ataaaagagattattaattatcttaatgcttgcaactattataattttaagttaagcaat
aaaattgtcgatgcaaaaaatgcagttttatggtgcgttaatgctgatgaaattatgcag
ttgctttcaaaatataaaaatatagttttctacgatataccatttgattcaaaaatgttt
tataatatattagcaaacaacagaggaagtgttgtacaccttttatttggaaagaaagac
ttaaaaagcagtttaaatgatatctgcaatattgtgccgagaaggagtgattttgctaaa
gtatttttaagcataaaagaaaattcagatacgttgttattgagagatcaaatctacgat
tattttaatttgaattctataaagtcaatgatatgtttaaaaattcttaaagacaatgga
ttgataaatatagaagaaagtgataatatttttgtgttaaggagaaatagcgtcgattca
aaagtggatattaaagatcatcagttattaaagaagctgtacatggcggaaaaaagtttt
ataaaatttgcttttcaaatattgaaaaagaatgttaaggaggaaacagcatga
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