Thermoanaerobacterium saccharolyticum: Tsac_1822
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Entry
Tsac_1822 CDS
T02137
Name
(GenBank) DNA polymerase III polC-type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
tsh
Thermoanaerobacterium saccharolyticum
Pathway
tsh03030
DNA replication
tsh03430
Mismatch repair
tsh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Tsac_1822
03430 Mismatch repair
Tsac_1822
03440 Homologous recombination
Tsac_1822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsh03032
]
Tsac_1822
03400 DNA repair and recombination proteins [BR:
tsh03400
]
Tsac_1822
Enzymes [BR:
tsh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Tsac_1822
DNA replication proteins [BR:
tsh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Tsac_1822
DNA repair and recombination proteins [BR:
tsh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Tsac_1822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
HHH_6
RNase_H_2
Rv2179c-like
tRNA_anti-codon
DEDDh_C
HHH_3
DUF655
Radical_SAM
tRNA_anti_2
DUF6282
Motif
Other DBs
NCBI-ProteinID:
AFK86828
UniProt:
I3VWD3
LinkDB
All DBs
Position
1881079..1885311
Genome browser
AA seq
1410 aa
AA seq
DB search
MLPSFLKEELGISDIKINKISLCLKERKLILFLPFNFKKDVSKLESLKSTIKSKIPLLSN
IEFEFTGADNIDVNSVLNDYWDDIIKKASEKYPGTLSFIKSCHVSIKDEEHVIIKASNEV
SFNFLKKNKIDAYIGELIKEYYDLDVNFALDFDEAIYDKLHEEIKKDEEILANNIITSPP
ESSQKIESDVDDNDSKVLLGKEINTEIVKICDVFQEGDDVAIKGEIFSIDFREIKSKYLM
TFDITDTTSSFTVKAFLNGEKYNLIKDRLTIGSNVKVRGTVIYDKYERDLILNAKDVELC
EKSVRVDSHPQKRVELHVHTQMSSMDGVSSAESLIRRASEWGHKAIAITDHAVLQAYPEA
QSAAKKYGVKVIYGVEGYLVNDGVPIVSGSTSMTIDGSFVVFDIETTGLSSINDNIIEIG
AVKIKNCQIVDTFETFVNPQVHISKFITKLTGITDDMVKEYPSIEEILPKFLDFIKDSIL
VAHNANFDVTFIKTKARNLGMEVDNPVLDTLELSRHMYENLKNYKLDTVAQHLGVSLENH
HRAVDDAKATAEIFIKSINKLKENGIEKVNEINDYLKNKVDIKKMPTYHVIILVRNQKGL
RNLYELVSRSNLEYFHRNPRIPKSLLSQMREGLLIGSACEQGEVFRGLISNLDDDKLHEI
ASYYDYLEIQPLGNNEFLIDKGEVKNKEELIKINKRIYDLGKQLKKPVVATCDVHFLDPW
DNVYRKILMYGKGFKDADRQPPLYFRTTDEMLREFDYFDEEIAREIVIDNPNQIADSIED
VKPIPDGTFPPSIEGAEEELRKLTLNKAHEIYGEKLPEIVEKRLDKELNSIINNGYAVMY
IIAQKLVTKSLSDGYLVGSRGSVGSSFVATMSGITEVNPLPPHYICPHCKHSEFILDGSY
GSGVDMPDKDCPQCGTKMRKDGHDIPFEVFLGFEGDKEPDIDLNFSGDYQPIAHKYTEEI
FGIGHVFRAGTIGTLADKTAYGFVKKYFEEKNLTVHNAEIKRLVMGCTGAKRTTGQHPGG
VMVVPKDKDIYDFTPIQHPADAQDSDIITTHFDYHSISGRLLKLDILGHDDPTVIRMLED
LTGINAREIPLDDKKTMSLFTSVEALNIDPEDINCTVGTLGLPEFGTKFVRQMLVDTKPT
TFAELVRISGLSHGTDVWLNNAQDIIKEGKATLKEVISTRDDIMLFLISKGLDKKLSFKI
MESVRKGKGIKDEEIEEMKKHNVPDWFIQSCQKIKYMFPKAHAVAYVIMAFRIAYFKVHH
PEAFYATYFTVRADEFNLDMMDSLEKIKENIRLIESKGNNATAKEKGLLTILEVGLEMYL
RGLRFTNIDLYKSDAVKFLITKDGILPPLNSLEGIGKQAAKIIAEEREKGKFLSIEDLRN
RTRISKTVIDILKQHGCLQDIPESNQLSLF
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgctaccttcttttcttaaagaggaattaggtataagcgacataaaaataaataaaata
agtttatgtttaaaggaaagaaagcttatactgtttttgccttttaattttaaaaaagat
gtttcaaaattagaatctttaaaatctactattaaatcaaaaatccctctactttctaat
atagaatttgaatttacaggtgcagataacattgacgtaaattcagttttaaatgattat
tgggatgatattataaaaaaagccagtgaaaaatatcctggcactttaagttttataaaa
tcatgtcatgtatcgattaaagatgaggaacatgtaataataaaggcgtcaaatgaagta
tcttttaattttctaaagaaaaacaaaatcgatgcgtatattggcgaattgataaaagaa
tattatgatctagacgtaaattttgctttagattttgatgaagcaatatatgacaaactt
catgaagaaatcaaaaaggacgaagaaatcttggcaaataacatcatcacaagtcctcca
gaaagcagccaaaaaattgaaagtgatgtggatgataatgacagcaaagtattacttgga
aaagaaataaatacagaaattgtaaaaatatgcgatgtatttcaagaaggtgatgatgtt
gcaataaaaggtgaaattttttcaatagatttccgcgaaataaaatctaaatatctgatg
acttttgatattactgatactacatcttcatttacagttaaagcatttttaaatggtgaa
aagtacaatctaattaaagacagattgacaataggaagcaatgtaaaagtgcgcggtact
gttatttacgataaatatgaaagagatctaatattgaatgctaaagacgtagaactatgc
gagaaatctgtcagagtagattctcatccacaaaaaagggtagagttgcatgtacataca
caaatgagcagcatggatggagtaagctctgcagagtctttaatcagaagggcatcagag
tgggggcacaaagcgattgcaataacagatcatgctgtattgcaggcttatcctgaagct
caaagtgctgcgaaaaaatatggtgttaaagtcatctacggcgtagagggttatcttgtc
aatgatggtgttccaatcgtcagcggaagcacatctatgactattgatggcagctttgtt
gtatttgacattgaaactactggtctttcaagcattaatgacaatattattgaaattggg
gctgtcaagataaagaattgtcaaatagtagatacattcgagacttttgtgaatccacaa
gttcacatatctaaatttataacaaaattgaccggcataacagacgacatggttaaagag
tacccatctattgaagaaatcttgcctaaatttttggactttataaaggattctattctt
gtagcgcataatgcaaactttgacgtgacttttataaagacaaaagccagaaatcttggt
atggaagtggacaatcccgttttagacactttagagttaagcaggcacatgtatgaaaat
ctaaaaaattacaaactggatactgtagcgcagcatcttggtgtgtcacttgaaaatcat
catagagccgtagacgatgctaaagcaactgctgaaatttttattaaaagtatcaataag
ctgaaagaaaacggaatagaaaaagtaaatgagataaacgattatttaaaaaacaaggtt
gacataaaaaaaatgcctacatatcatgtaatcatacttgtcagaaaccaaaaagggttg
agaaatctctatgaattagtatcaagatcaaatttggagtattttcacagaaatccaaga
attcctaaaagtcttttgtcgcaaatgagagaaggattattaattggttctgcttgtgaa
caaggtgaagtttttaggggattaatatcaaatcttgatgatgataaattacacgagatc
gctagttactatgattatttagaaatacaacctttaggaaataacgaatttttaattgat
aagggtgaggtaaaaaacaaagaagaattgattaagataaacaaaagaatttatgatttg
ggaaaacaactcaaaaaaccggttgttgcgacgtgtgatgttcattttttagacccttgg
gataatgtgtatagaaagatactcatgtatggaaaagggtttaaagatgctgatagacag
ccaccactttattttagaacaaccgatgaaatgctgagagaatttgattactttgatgaa
gagattgcaagggagattgtcatagacaatcctaatcaaatagcagattctatagaagat
gttaaaccaataccagatggcacatttcctccgtcaatagaaggtgccgaagaagagctt
aggaaattgacattaaacaaggctcatgaaatatatggtgaaaaattgccagagatagtt
gaaaaaaggctggacaaagagctaaattctatcataaataatggttacgctgttatgtac
atcatagctcaaaagttagtgacaaaatcactaagtgatggttatttagttggttcaaga
ggttcggtcggttcgtcgtttgtggcaaccatgagcggaataaccgaggttaatccattg
ccacctcattatatctgccctcattgcaagcactcagagtttatattagatggaagttat
ggttctggtgtggatatgcctgataaagattgtccacaatgcggaacaaagatgagaaaa
gatggacatgatattccatttgaagtgtttcttggatttgaaggggataaagaaccagat
atagatttaaacttttcaggagattatcagccgatagcacataagtacacagaagaaata
tttggaataggtcacgtctttagagctggaactattggtacattggctgataaaacagca
tacggctttgtgaaaaagtatttcgaagaaaaaaatttaacggttcataatgcagaaatc
aagaggttagtcatgggttgtactggtgccaaaaggactacagggcaacatccaggtggt
gttatggttgtccccaaagacaaagacatttatgattttacaccaatacagcatcctgca
gatgcacaagattcagacataataacaacacactttgattatcactctataagcggaaga
ctgcttaagcttgatatacttggtcatgatgatcctacagtaatcagaatgctggaagat
ttaacaggaatcaatgccagagaaataccattagatgataaaaagacgatgagccttttt
acaagtgtagaagctcttaacatagatccagaagatataaattgcacagtaggcacttta
ggattgcctgaatttggaacgaaatttgtaagacagatgctggttgatacaaagccgaca
acttttgcagagcttgtaagaataagcggactttcacatggtacagatgtttggcttaat
aatgcacaagacataataaaagaaggcaaagccacacttaaagaggtaatttccacacga
gatgatataatgttatttcttatcagcaaagggcttgacaagaagttgtctttcaagata
atggaaagcgttagaaaaggaaagggcataaaagacgaggaaatagaggaaatgaaaaag
cataatgtgcctgattggtttattcagtcgtgtcaaaaaatcaagtacatgtttcctaaa
gcccatgcagttgcttatgtcataatggcttttaggatagcttattttaaagtgcaccac
cctgaggctttttatgccacgtattttactgttagagctgatgaatttaatttggatatg
atggattcattagaaaaaatcaaagaaaatataaggctaattgaatcaaagggcaataat
gctacagcaaaggagaaaggcttattgacaatattagaggttggtcttgaaatgtacctt
agaggcctaagattcacaaatattgatttgtataaatctgatgcggtgaaatttttaatt
acaaaagatggcatattgcctccattgaactcattggaaggtataggtaagcaagcagcg
aagataatagctgaagagagagaaaaaggcaaatttttatcaatagaagatttgagaaat
agaacgagaatcagtaaaactgttatcgacattttaaagcagcatggttgcttgcaggat
attcctgaatcaaatcaattaagtttattttaa
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integrated database retrieval system
