KEGG   Thermococcus sibiricus: TSIB_0027
Entry
TSIB_0027         CDS       T00928                                 
Name
(GenBank) DNA-directed RNA polymerase, subunit e''
  KO
K15171  transcription elongation factor SPT4
Organism
tsi  Thermococcus sibiricus
Brite
KEGG Orthology (KO) [BR:tsi00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    TSIB_0027
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tsi03021]
    TSIB_0027
   03019 Messenger RNA biogenesis [BR:tsi03019]
    TSIB_0027
Transcription machinery [BR:tsi03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     TSIB_0027
  RNA polymerase I system
     TSIB_0027
Messenger RNA biogenesis [BR:tsi03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     TSIB_0027
SSDB
Motif
Pfam: Spt4 DZR RecR_ZnF zn-ribbon_14 NRDD HypA Zn_ribbon_3 Zn_ribbon_RRN7
Other DBs
NCBI-ProteinID: ACS89098
UniProt: C6A0F3
LinkDB
Position
25979..26164
AA seq 61 aa
MTEKACRHCHYITNEDRCPACGSRDLSDEWFDLVIILDPENSRIAQTLGVKKPGKYAIRV
R
NT seq 186 nt   +upstreamnt  +downstreamnt
atgacggaaaaggcctgcagacactgtcattacatcaccaatgaagatcgatgccctgca
tgtgggagcagagatttaagtgacgaatggtttgatcttgtgataatcctcgatccagaa
aactccaggatagcccaaacactcggagtgaaaaaaccggggaaatatgccataagggtc
aggtaa

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