Thermococcus sibiricus: TSIB_0096
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Entry
TSIB_0096 CDS
T00928
Name
(GenBank) DNA double-strand break repair rad50 ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tsi
Thermococcus sibiricus
Brite
KEGG Orthology (KO) [BR:
tsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsi03400
]
TSIB_0096
DNA repair and recombination proteins [BR:
tsi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TSIB_0096
Archaeal homologous recombinant proteins
TSIB_0096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
SMC_N
AAA_21
AAA_29
AAA_27
Rad50_zn_hook
SbcC_Walker_B
Legum_prodom
AAA_16
DUF3090
DEAD
AAA_13
FtsK_SpoIIIE
Flagellin_N
Motif
Other DBs
NCBI-ProteinID:
ACS89164
UniProt:
C6A0L9
LinkDB
All DBs
Position
94663..97350
Genome browser
AA seq
895 aa
AA seq
DB search
MAWNEVRKMRIRSLKIKNFRAHENSHVEFNDGINLIIGQNGSGKSSILEAVFASLYLGHG
SFPRGYKKVNTRIGKSGFELVLKFEHNGKNYEIVRKSNGESYLKENGGVLHEKDSDIARW
SERYLYPLHVFRNALYIRQGEIENILVDEDVREKVLRKVLGIEDFENSANNAQEVLRELR
KKREYLEKLIQASGDIQNKIKEQEKRLGEVIHKINELRKKEIETAEKLSAVSKRYEELKE
IKEILTQKEKEKLSVEGSMKKLEADIKNTRDRIAELEKELRVLRDKEGRLKEIEWVKKEY
ETLNALMVKRKELQEIELRKSRLEERIKVLQKQIQELESKSEELEETKKLEKKLLDDYNV
LKTFAETYDMVRQLVVEKEKYSTELEKAGYTKEKLVNEIKNVEKAKKELKEVEDKILTLK
GELNGLDKIEKSLRDNVSKLEGAKECPLCKRPIEEHEEGEIKREYTAELAKIEKKKEEIA
EALRKALKRKTELEKIRNNESKLIKLHKTLEFLENVESKLEKYNIEELKKKTEEFEKVRE
RVIEVKKEIIRVNKELEKLNEFKNEKETLLRKLGDLERKKAEVLHEIEEKGFESFEDVEK
RLKELEPLYKEYISLSNVPQEIQIREKRQELLETTLKDKEKDLNLTKNVFKMLSKEIEEL
KVRFTVEEFEKISKEYLSLSSLHAAVLKEIEGNENLKEEVARNLEDLKRQLEAIKKAKEE
SELIEKMMADMKVLREKLLKLKAEAERRGLSEVERVASELFSDMTERKYQGIKIIREKKF
GRERIRIVVLYQGQEEEIDFLSGGERIALGLSFRLALSLYKVKNMELLILDEPTPFLDEE
RRKKLVEIITQHLRKIPQVIIVSHDEELKDAADYVIRVSLIGGKSNVEVESLGTY
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
gtggcttggaatgaggtgagaaaaatgaggataagatcccttaaaataaaaaattttaga
gctcatgaaaattctcatgtggagtttaatgatggaattaatttgataatcggccagaat
ggttctggaaagagttcaattcttgaagcagtatttgctagcctttatttaggccatggg
agttttccaagaggatataaaaaagtaaatacaagaattggaaaatctgggtttgaactc
gttttgaagtttgagcataatggaaaaaattatgaaattgttaggaaatccaatggagag
agctatctgaaagaaaatggaggagttttacacgagaaggatagtgacatagctagatgg
agtgagagatatctttatcccctccatgtgtttagaaatgccttatatataagacaggga
gaaatagaaaacattcttgttgatgaggatgtgagggaaaaggtcctcagaaaagtgtta
ggaattgaggattttgaaaatagtgctaacaatgcccaggaagtccttagagaattaaga
aagaaaagagaatatctggagaagttaattcaggcttcaggagatatccaaaataaaatt
aaagaacaagagaaaagacttggggaggttatacataagatcaatgaactcagaaagaaa
gaaattgaaacagcagagaagctttctgcagtctctaaaagatacgaagaactcaaggag
attaaggaaatattaacccaaaaggaaaaagaaaaactctcagttgaaggttcaatgaag
aagctcgaggcggatataaaaaatactagagatagaattgcagaacttgaaaaagaactc
agggtcttgagggataaagaaggtcgtttaaaggagatagaatgggtgaaaaaagaatat
gaaacattaaatgctctaatggtaaaaagaaaagagctgcaggaaattgaattaagaaaa
agccgtttagaggaaagaatcaaagtcttgcaaaagcaaatacaagaacttgagtcaaaa
tctgaagagcttgaagagactaagaaacttgaaaaaaagcttttagatgattataatgtg
ctaaaaacatttgcagaaacttatgatatggtgcgacagctggttgttgagaaggagaag
tactcaacggagcttgagaaggcaggttataccaaggaaaaacttgttaatgaaattaaa
aatgttgaaaaggcaaaaaaagagttgaaagaggttgaagataagattctcacgttaaaa
ggcgaacttaatggactggataaaattgagaagagcttgagagataatgtatcaaagtta
gagggagcaaaagaatgtcctctctgtaagaggccaatagaggagcatgaagaaggagaa
attaagagagaatacactgccgaacttgccaagattgaaaagaaaaaggaagagattgct
gaagcgctgagaaaagctttgaaaagaaaaacagagcttgaaaaaatcaggaataatgaa
agtaagcttattaaacttcacaagactcttgaattcttggaaaatgttgaaagcaaactt
gaaaaatataacatcgaagaactaaagaagaaaactgaagagtttgagaaggtaagagaa
agagtcattgaagtaaagaaggaaataattagagtaaacaaggaattagaaaaactgaat
gagtttaaaaatgagaaagaaactcttctgcggaaattaggggatcttgaaagaaaaaag
gcagaggttttgcatgaaattgaagaaaagggttttgaatcttttgaggatgtggaaaag
agactaaaagagttggagcctctctacaaggagtatatatctctcagtaatgttccacaa
gaaatccaaatccgggaaaaaaggcaagagttgcttgaaacaacgcttaaagataaggaa
aaagaccttaatctaactaaaaatgtatttaaaatgctttctaaggagatagaagaatta
aaagtcagattcaccgtagaggaatttgagaagatcagcaaggaatatctttctttgtcc
agtctgcatgctgctgtacttaaggagattgaagggaatgaaaacctaaaagaagaagtt
gccaggaatttagaggatttaaaaagacaattagaagcaattaagaaggccaaagaagaa
tcggagcttatagaaaaaatgatggcagatatgaaagttttaagagaaaaactgcttaag
ctaaaagcagaagctgaaaggagaggtttaagtgaagtggagagggttgccagtgaactt
ttctctgatatgacggagagaaagtatcagggaataaaaatcattagagaaaaaaagttt
ggcagggagaggataaggatagttgttctttaccaagggcaagaagaggagattgatttc
ttaagtggtggggagagaattgctttggggctatcctttagattggctctgtctctttac
aaagttaaaaacatggaacttctgattttagatgaaccaactccattcttagatgaagag
aggaggaaaaaactggttgagataataacccagcacttgagaaaaatcccacaggtgata
atagtatcgcatgatgaagaacttaaagatgctgctgattatgtgattagggtttctctt
atcgggggaaagagcaacgtagaggtggaaagccttggcacgtattag
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