KEGG   Thermococcus sibiricus: TSIB_0096
Entry
TSIB_0096         CDS       T00928                                 
Name
(GenBank) DNA double-strand break repair rad50 ATPase
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
tsi  Thermococcus sibiricus
Brite
KEGG Orthology (KO) [BR:tsi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tsi03400]
    TSIB_0096
DNA repair and recombination proteins [BR:tsi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     TSIB_0096
    Archaeal homologous recombinant proteins
     TSIB_0096
SSDB
Motif
Pfam: AAA_23 AAA_15 SMC_N AAA_21 AAA_29 AAA_27 Rad50_zn_hook SbcC_Walker_B Legum_prodom AAA_16 DUF3090 DEAD AAA_13 FtsK_SpoIIIE Flagellin_N
Other DBs
NCBI-ProteinID: ACS89164
UniProt: C6A0L9
LinkDB
Position
94663..97350
AA seq 895 aa
MAWNEVRKMRIRSLKIKNFRAHENSHVEFNDGINLIIGQNGSGKSSILEAVFASLYLGHG
SFPRGYKKVNTRIGKSGFELVLKFEHNGKNYEIVRKSNGESYLKENGGVLHEKDSDIARW
SERYLYPLHVFRNALYIRQGEIENILVDEDVREKVLRKVLGIEDFENSANNAQEVLRELR
KKREYLEKLIQASGDIQNKIKEQEKRLGEVIHKINELRKKEIETAEKLSAVSKRYEELKE
IKEILTQKEKEKLSVEGSMKKLEADIKNTRDRIAELEKELRVLRDKEGRLKEIEWVKKEY
ETLNALMVKRKELQEIELRKSRLEERIKVLQKQIQELESKSEELEETKKLEKKLLDDYNV
LKTFAETYDMVRQLVVEKEKYSTELEKAGYTKEKLVNEIKNVEKAKKELKEVEDKILTLK
GELNGLDKIEKSLRDNVSKLEGAKECPLCKRPIEEHEEGEIKREYTAELAKIEKKKEEIA
EALRKALKRKTELEKIRNNESKLIKLHKTLEFLENVESKLEKYNIEELKKKTEEFEKVRE
RVIEVKKEIIRVNKELEKLNEFKNEKETLLRKLGDLERKKAEVLHEIEEKGFESFEDVEK
RLKELEPLYKEYISLSNVPQEIQIREKRQELLETTLKDKEKDLNLTKNVFKMLSKEIEEL
KVRFTVEEFEKISKEYLSLSSLHAAVLKEIEGNENLKEEVARNLEDLKRQLEAIKKAKEE
SELIEKMMADMKVLREKLLKLKAEAERRGLSEVERVASELFSDMTERKYQGIKIIREKKF
GRERIRIVVLYQGQEEEIDFLSGGERIALGLSFRLALSLYKVKNMELLILDEPTPFLDEE
RRKKLVEIITQHLRKIPQVIIVSHDEELKDAADYVIRVSLIGGKSNVEVESLGTY
NT seq 2688 nt   +upstreamnt  +downstreamnt
gtggcttggaatgaggtgagaaaaatgaggataagatcccttaaaataaaaaattttaga
gctcatgaaaattctcatgtggagtttaatgatggaattaatttgataatcggccagaat
ggttctggaaagagttcaattcttgaagcagtatttgctagcctttatttaggccatggg
agttttccaagaggatataaaaaagtaaatacaagaattggaaaatctgggtttgaactc
gttttgaagtttgagcataatggaaaaaattatgaaattgttaggaaatccaatggagag
agctatctgaaagaaaatggaggagttttacacgagaaggatagtgacatagctagatgg
agtgagagatatctttatcccctccatgtgtttagaaatgccttatatataagacaggga
gaaatagaaaacattcttgttgatgaggatgtgagggaaaaggtcctcagaaaagtgtta
ggaattgaggattttgaaaatagtgctaacaatgcccaggaagtccttagagaattaaga
aagaaaagagaatatctggagaagttaattcaggcttcaggagatatccaaaataaaatt
aaagaacaagagaaaagacttggggaggttatacataagatcaatgaactcagaaagaaa
gaaattgaaacagcagagaagctttctgcagtctctaaaagatacgaagaactcaaggag
attaaggaaatattaacccaaaaggaaaaagaaaaactctcagttgaaggttcaatgaag
aagctcgaggcggatataaaaaatactagagatagaattgcagaacttgaaaaagaactc
agggtcttgagggataaagaaggtcgtttaaaggagatagaatgggtgaaaaaagaatat
gaaacattaaatgctctaatggtaaaaagaaaagagctgcaggaaattgaattaagaaaa
agccgtttagaggaaagaatcaaagtcttgcaaaagcaaatacaagaacttgagtcaaaa
tctgaagagcttgaagagactaagaaacttgaaaaaaagcttttagatgattataatgtg
ctaaaaacatttgcagaaacttatgatatggtgcgacagctggttgttgagaaggagaag
tactcaacggagcttgagaaggcaggttataccaaggaaaaacttgttaatgaaattaaa
aatgttgaaaaggcaaaaaaagagttgaaagaggttgaagataagattctcacgttaaaa
ggcgaacttaatggactggataaaattgagaagagcttgagagataatgtatcaaagtta
gagggagcaaaagaatgtcctctctgtaagaggccaatagaggagcatgaagaaggagaa
attaagagagaatacactgccgaacttgccaagattgaaaagaaaaaggaagagattgct
gaagcgctgagaaaagctttgaaaagaaaaacagagcttgaaaaaatcaggaataatgaa
agtaagcttattaaacttcacaagactcttgaattcttggaaaatgttgaaagcaaactt
gaaaaatataacatcgaagaactaaagaagaaaactgaagagtttgagaaggtaagagaa
agagtcattgaagtaaagaaggaaataattagagtaaacaaggaattagaaaaactgaat
gagtttaaaaatgagaaagaaactcttctgcggaaattaggggatcttgaaagaaaaaag
gcagaggttttgcatgaaattgaagaaaagggttttgaatcttttgaggatgtggaaaag
agactaaaagagttggagcctctctacaaggagtatatatctctcagtaatgttccacaa
gaaatccaaatccgggaaaaaaggcaagagttgcttgaaacaacgcttaaagataaggaa
aaagaccttaatctaactaaaaatgtatttaaaatgctttctaaggagatagaagaatta
aaagtcagattcaccgtagaggaatttgagaagatcagcaaggaatatctttctttgtcc
agtctgcatgctgctgtacttaaggagattgaagggaatgaaaacctaaaagaagaagtt
gccaggaatttagaggatttaaaaagacaattagaagcaattaagaaggccaaagaagaa
tcggagcttatagaaaaaatgatggcagatatgaaagttttaagagaaaaactgcttaag
ctaaaagcagaagctgaaaggagaggtttaagtgaagtggagagggttgccagtgaactt
ttctctgatatgacggagagaaagtatcagggaataaaaatcattagagaaaaaaagttt
ggcagggagaggataaggatagttgttctttaccaagggcaagaagaggagattgatttc
ttaagtggtggggagagaattgctttggggctatcctttagattggctctgtctctttac
aaagttaaaaacatggaacttctgattttagatgaaccaactccattcttagatgaagag
aggaggaaaaaactggttgagataataacccagcacttgagaaaaatcccacaggtgata
atagtatcgcatgatgaagaacttaaagatgctgctgattatgtgattagggtttctctt
atcgggggaaagagcaacgtagaggtggaaagccttggcacgtattag

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